Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:101171115-101246463

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Plekhh3 11 101162679 to 101171351 8672 - protein coding gene pleckstrin homology domain containing, family H (with MyTH4 domain) member 3
Cpgi3851 11 101170214 to 101171516 1302 CpG island CpG island 3851
Tssr110916 11 101171196 to 101171207 11 - TSS region transcription start site region 110916
Tssr110917 11 101171302 to 101171353 51 - TSS region transcription start site region 110917
Cpgi3852 11 101171971 to 101172544 573 CpG island CpG island 3852
Ccr10 11 101172998 to 101175443 2445 - protein coding gene chemokine (C-C motif) receptor 10
Cpgi3853 11 101173445 to 101174633 1188 CpG island CpG island 3853
Cntnap1 11 101174649 to 101190723 16074 + protein coding gene contactin associated protein-like 1
Tssr110918 11 101175440 to 101175444 4 - TSS region transcription start site region 110918
Cpgi3854 11 101176127 to 101176617 490 CpG island CpG island 3854
Tssr3674 11 101176193 to 101176247 54 + TSS region transcription start site region 3674
Cpgi3855 11 101177974 to 101178372 398 CpG island CpG island 3855
Tssr105051 11 101180094 to 101180101 7 + TSS region transcription start site region 105051
Cpgi3856 11 101180328 to 101180493 165 CpG island CpG island 3856
Tssr105052 11 101181329 to 101181378 49 + TSS region transcription start site region 105052
Cpgi3857 11 101186526 to 101186725 199 CpG island CpG island 3857
Tssr105053 11 101188274 to 101188303 29 + TSS region transcription start site region 105053
Ezh1 11 101191115 to 101226463 35348 - protein coding gene enhancer of zeste 1 polycomb repressive complex 2 subunit
Cpgi3858 11 101225855 to 101226685 830 CpG island CpG island 3858
Tssr110919 11 101226414 to 101226455 41 - TSS region transcription start site region 110919
Tssr110920 11 101232294 to 101232335 41 - TSS region transcription start site region 110920
D830013H23Rik 11 101245105 to 101246745 1640 unclassified gene RIKEN cDNA D830013H23 gene
Cpgi3859 11 101245956 to 101246887 931 CpG island CpG island 3859
Tssr105054 11 101245996 to 101246044 48 + TSS region transcription start site region 105054
Tssr105055 11 101246047 to 101246058 11 + TSS region transcription start site region 105055
Tssr105056 11 101246063 to 101246068 5 + TSS region transcription start site region 105056
Tssr105057 11 101246329 to 101246332 3 + TSS region transcription start site region 105057
Ramp2 11 101246334 to 101248250 1916 + protein coding gene receptor (calcitonin) activity modifying protein 2
Tssr105058 11 101246345 to 101246350 5 + TSS region transcription start site region 105058
Tssr105059 11 101246356 to 101246370 14 + TSS region transcription start site region 105059
Tssr105060 11 101246383 to 101246391 8 + TSS region transcription start site region 105060
Tssr105061 11 101246405 to 101246422 17 + TSS region transcription start site region 105061