Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:100424162-100564175

Filter by:
40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fkbp10 11 100415697 to 100424824 9127 + protein coding gene FK506 binding protein 10
Nt5c3b 11 100422317 to 100441803 19486 - protein coding gene 5'-nucleotidase, cytosolic IIIB
Cpgi3813 11 100440668 to 100441306 638 CpG island CpG island 3813
Tssr110811 11 100440972 to 100440990 18 - TSS region transcription start site region 110811
Tssr110812 11 100441006 to 100441038 32 - TSS region transcription start site region 110812
Tssr110813 11 100441058 to 100441110 52 - TSS region transcription start site region 110813
Tssr110814 11 100441795 to 100441813 18 - TSS region transcription start site region 110814
Tssr110815 11 100441818 to 100441825 7 - TSS region transcription start site region 110815
Tssr110816 11 100441829 to 100441833 4 - TSS region transcription start site region 110816
Tssr104938 11 100441882 to 100441938 56 + TSS region transcription start site region 104938
Klhl10 11 100441917 to 100457022 15105 + protein coding gene kelch-like 10
Tssr104939 11 100441947 to 100441954 7 + TSS region transcription start site region 104939
Gm27374 11 100442395 to 100442475 80 - miRNA gene predicted gene, 27374
2610002J23Rik 11 100457122 to 100461692 4570 unclassified gene RIKEN cDNA 2610002J23 gene
Tssr110817 11 100461667 to 100461671 4 - TSS region transcription start site region 110817
Klhl11 11 100462614 to 100472741 10127 - protein coding gene kelch-like 11
Cpgi3814 11 100471892 to 100473164 1272 CpG island CpG island 3814
Tssr110818 11 100472725 to 100472759 34 - TSS region transcription start site region 110818
Tssr110819 11 100472762 to 100472767 5 - TSS region transcription start site region 110819
Tssr110820 11 100472772 to 100472788 16 - TSS region transcription start site region 110820
Tssr110821 11 100472794 to 100472811 17 - TSS region transcription start site region 110821
Acly 11 100476353 to 100528000 51647 - protein coding gene ATP citrate lyase
Tssr110822 11 100476729 to 100476732 3 - TSS region transcription start site region 110822
Tssr110823 11 100477086 to 100477113 27 - TSS region transcription start site region 110823
Mir7116 11 100478411 to 100478480 69 - miRNA gene microRNA 7116
Tssr110824 11 100494162 to 100494175 13 - TSS region transcription start site region 110824
Tssr110825 11 100494186 to 100494204 18 - TSS region transcription start site region 110825
Tssr110826 11 100516372 to 100516380 8 - TSS region transcription start site region 110826
Cpgi3815 11 100527048 to 100528568 1520 CpG island CpG island 3815
Tssr110827 11 100527862 to 100527878 16 - TSS region transcription start site region 110827
Tssr110828 11 100527896 to 100527916 20 - TSS region transcription start site region 110828
n-TSgga1 11 100538158 to 100538230 72 + tRNA gene nuclear encoded tRNA serine 1 (anticodon GGA)
Cpgi3816 11 100545421 to 100545945 524 CpG island CpG island 3816
Tssr110829 11 100545579 to 100545593 14 - TSS region transcription start site region 110829
Ttc25 11 100545632 to 100572566 26934 + protein coding gene tetratricopeptide repeat domain 25
Tssr104940 11 100545672 to 100545678 6 + TSS region transcription start site region 104940
Tssr104941 11 100545683 to 100545736 53 + TSS region transcription start site region 104941
Tssr104942 11 100553339 to 100553343 4 + TSS region transcription start site region 104942
Tssr104943 11 100553999 to 100554018 19 + TSS region transcription start site region 104943
Cpgi3817 11 100555794 to 100556115 321 CpG island CpG island 3817