Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:100128099-100258103

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70 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr104900 11 100129299 to 100129305 6 + TSS region transcription start site region 104900
30.MMHAP38FLB6.seq 11 100129813 to 100129974 161 DNA segment DNA segment, 30.MMHAP38FLB6.seq
Krt15 11 100131758 to 100135928 4170 - protein coding gene keratin 15
Tssr104901 11 100133634 to 100133676 42 + TSS region transcription start site region 104901
Tssr104902 11 100133678 to 100133699 21 + TSS region transcription start site region 104902
Tssr104903 11 100133760 to 100133771 11 + TSS region transcription start site region 104903
Tssr110742 11 100134496 to 100134552 56 - TSS region transcription start site region 110742
Tssr104904 11 100135377 to 100135421 44 + TSS region transcription start site region 104904
Tssr104905 11 100135466 to 100135482 16 + TSS region transcription start site region 104905
Tssr110743 11 100135501 to 100135528 27 - TSS region transcription start site region 110743
Tssr110744 11 100135939 to 100135954 15 - TSS region transcription start site region 110744
Tssr110745 11 100136049 to 100136087 38 - TSS region transcription start site region 110745
Tssr110746 11 100137768 to 100137787 19 - TSS region transcription start site region 110746
Tssr104906 11 100140590 to 100140593 3 + TSS region transcription start site region 104906
Krt19 11 100140810 to 100145926 5116 - protein coding gene keratin 19
Tssr104907 11 100140814 to 100140817 3 + TSS region transcription start site region 104907
Tssr110747 11 100140852 to 100140875 23 - TSS region transcription start site region 110747
Tssr104908 11 100140895 to 100140917 22 + TSS region transcription start site region 104908
Tssr104909 11 100140923 to 100140958 35 + TSS region transcription start site region 104909
Tssr104910 11 100141000 to 100141013 13 + TSS region transcription start site region 104910
Tssr110748 11 100141011 to 100141158 147 - TSS region transcription start site region 110748
Cpgi3804 11 100141024 to 100141210 186 CpG island CpG island 3804
Tssr104911 11 100141321 to 100141362 41 + TSS region transcription start site region 104911
Tssr104912 11 100141524 to 100141567 43 + TSS region transcription start site region 104912
Tssr110749 11 100141547 to 100141593 46 - TSS region transcription start site region 110749
Tssr110750 11 100141628 to 100141646 18 - TSS region transcription start site region 110750
Tssr110751 11 100141678 to 100141690 12 - TSS region transcription start site region 110751
Tssr110752 11 100141827 to 100141857 30 - TSS region transcription start site region 110752
Tssr110753 11 100142127 to 100142151 24 - TSS region transcription start site region 110753
Tssr110754 11 100142186 to 100142208 22 - TSS region transcription start site region 110754
D11Mit1003 11 100143011 to 100143274 263 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 1003
Tssr110755 11 100143563 to 100143587 24 - TSS region transcription start site region 110755
Tssr110756 11 100143705 to 100143742 37 - TSS region transcription start site region 110756
D11Mit59.2 11 100144456 to 100144614 158 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 59.2
D11Mit59 11 100144564 to 100144799 235 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 59
D11Mit59.1 11 100144730 to 100144848 118 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 59.1
Cpgi3805 11 100145263 to 100145898 635 CpG island CpG island 3805
Tssr104913 11 100145449 to 100145474 25 + TSS region transcription start site region 104913
Tssr104914 11 100145550 to 100145559 9 + TSS region transcription start site region 104914
Tssr104915 11 100145577 to 100145626 49 + TSS region transcription start site region 104915
Tssr110757 11 100145918 to 100145935 17 - TSS region transcription start site region 110757
Tssr110758 11 100145941 to 100145946 5 - TSS region transcription start site region 110758
Tssr110759 11 100145966 to 100145978 12 - TSS region transcription start site region 110759
Tssr104916 11 100164647 to 100164654 7 + TSS region transcription start site region 104916
Gm39022 11 100166772 to 100181390 14618 + lncRNA gene predicted gene, 39022
Krt9 11 100186781 to 100193246 6465 - protein coding gene keratin 9
Tssr110760 11 100193099 to 100193103 4 - TSS region transcription start site region 110760
Tssr110761 11 100193253 to 100193256 3 - TSS region transcription start site region 110761
Krt14 11 100203162 to 100207510 4348 - protein coding gene keratin 14
Tssr110762 11 100203188 to 100203201 13 - TSS region transcription start site region 110762
Tssr110763 11 100203219 to 100203248 29 - TSS region transcription start site region 110763
Tssr110764 11 100204281 to 100204302 21 - TSS region transcription start site region 110764
Tssr104917 11 100204749 to 100204763 14 + TSS region transcription start site region 104917
Tssr110765 11 100206065 to 100206094 29 - TSS region transcription start site region 110765
Tssr104918 11 100206457 to 100206475 18 + TSS region transcription start site region 104918
Tssr104919 11 100206750 to 100206757 7 + TSS region transcription start site region 104919
Tssr110766 11 100207319 to 100207354 35 - TSS region transcription start site region 110766
Tssr110767 11 100207402 to 100207436 34 - TSS region transcription start site region 110767
Tssr110768 11 100207507 to 100207526 19 - TSS region transcription start site region 110768
Tssr110769 11 100207654 to 100207664 10 - TSS region transcription start site region 110769
Gm11597 11 100228845 to 100232078 3233 - pseudogene predicted gene 11597
Tssr104920 11 100243254 to 100243267 13 + TSS region transcription start site region 104920
Gm11598 11 100243273 to 100243629 356 + pseudogene predicted gene 11598
Krt16 11 100246091 to 100248902 2811 - protein coding gene keratin 16
Tssr110770 11 100246116 to 100246159 43 - TSS region transcription start site region 110770
Tssr110771 11 100246212 to 100246226 14 - TSS region transcription start site region 110771
Tssr110772 11 100247629 to 100247663 34 - TSS region transcription start site region 110772
Tssr110773 11 100248953 to 100248969 16 - TSS region transcription start site region 110773
Krt17 11 100256217 to 100261029 4812 - protein coding gene keratin 17
Tssr110774 11 100258067 to 100258079 12 - TSS region transcription start site region 110774