Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:100092186-100192208

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66 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Krt35 11 100092192 to 100096224 4032 - protein coding gene keratin 35
Tssr110729 11 100096237 to 100096242 5 - TSS region transcription start site region 110729
Tssr110730 11 100096273 to 100096279 6 - TSS region transcription start site region 110730
Krt36 11 100102007 to 100105626 3619 - protein coding gene keratin 36
Tssr110731 11 100105638 to 100105645 7 - TSS region transcription start site region 110731
Gm12347 11 100105771 to 100112106 6335 - lincRNA gene predicted gene 12347
Tssr110732 11 100112012 to 100112052 40 - TSS region transcription start site region 110732
Tssr110733 11 100112154 to 100112162 8 - TSS region transcription start site region 110733
Krt13 11 100117327 to 100121566 4239 - protein coding gene keratin 13
Tssr110734 11 100117402 to 100117428 26 - TSS region transcription start site region 110734
Tssr110735 11 100117440 to 100117454 14 - TSS region transcription start site region 110735
Tssr110736 11 100117631 to 100117646 15 - TSS region transcription start site region 110736
Tssr110737 11 100118833 to 100118843 10 - TSS region transcription start site region 110737
Tssr104897 11 100119074 to 100119084 10 + TSS region transcription start site region 104897
Tssr104898 11 100119086 to 100119097 11 + TSS region transcription start site region 104898
Tssr104899 11 100119405 to 100119416 11 + TSS region transcription start site region 104899
Tssr110738 11 100119699 to 100119719 20 - TSS region transcription start site region 110738
Tssr110739 11 100120430 to 100120440 10 - TSS region transcription start site region 110739
Tssr110740 11 100121558 to 100121572 14 - TSS region transcription start site region 110740
Tssr110741 11 100121704 to 100121711 7 - TSS region transcription start site region 110741
Tssr104900 11 100129299 to 100129305 6 + TSS region transcription start site region 104900
30.MMHAP38FLB6.seq 11 100129813 to 100129974 161 DNA segment DNA segment, 30.MMHAP38FLB6.seq
Krt15 11 100131758 to 100135928 4170 - protein coding gene keratin 15
Tssr104901 11 100133634 to 100133676 42 + TSS region transcription start site region 104901
Tssr104902 11 100133678 to 100133699 21 + TSS region transcription start site region 104902
Tssr104903 11 100133760 to 100133771 11 + TSS region transcription start site region 104903
Tssr110742 11 100134496 to 100134552 56 - TSS region transcription start site region 110742
Tssr104904 11 100135377 to 100135421 44 + TSS region transcription start site region 104904
Tssr104905 11 100135466 to 100135482 16 + TSS region transcription start site region 104905
Tssr110743 11 100135501 to 100135528 27 - TSS region transcription start site region 110743
Tssr110744 11 100135939 to 100135954 15 - TSS region transcription start site region 110744
Tssr110745 11 100136049 to 100136087 38 - TSS region transcription start site region 110745
Tssr110746 11 100137768 to 100137787 19 - TSS region transcription start site region 110746
Tssr104906 11 100140590 to 100140593 3 + TSS region transcription start site region 104906
Krt19 11 100140810 to 100145926 5116 - protein coding gene keratin 19
Tssr104907 11 100140814 to 100140817 3 + TSS region transcription start site region 104907
Tssr110747 11 100140852 to 100140875 23 - TSS region transcription start site region 110747
Tssr104908 11 100140895 to 100140917 22 + TSS region transcription start site region 104908
Tssr104909 11 100140923 to 100140958 35 + TSS region transcription start site region 104909
Tssr104910 11 100141000 to 100141013 13 + TSS region transcription start site region 104910
Tssr110748 11 100141011 to 100141158 147 - TSS region transcription start site region 110748
Cpgi3804 11 100141024 to 100141210 186 CpG island CpG island 3804
Tssr104911 11 100141321 to 100141362 41 + TSS region transcription start site region 104911
Tssr104912 11 100141524 to 100141567 43 + TSS region transcription start site region 104912
Tssr110749 11 100141547 to 100141593 46 - TSS region transcription start site region 110749
Tssr110750 11 100141628 to 100141646 18 - TSS region transcription start site region 110750
Tssr110751 11 100141678 to 100141690 12 - TSS region transcription start site region 110751
Tssr110752 11 100141827 to 100141857 30 - TSS region transcription start site region 110752
Tssr110753 11 100142127 to 100142151 24 - TSS region transcription start site region 110753
Tssr110754 11 100142186 to 100142208 22 - TSS region transcription start site region 110754
D11Mit1003 11 100143011 to 100143274 263 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 1003
Tssr110755 11 100143563 to 100143587 24 - TSS region transcription start site region 110755
Tssr110756 11 100143705 to 100143742 37 - TSS region transcription start site region 110756
D11Mit59.2 11 100144456 to 100144614 158 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 59.2
D11Mit59 11 100144564 to 100144799 235 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 59
D11Mit59.1 11 100144730 to 100144848 118 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 59.1
Cpgi3805 11 100145263 to 100145898 635 CpG island CpG island 3805
Tssr104913 11 100145449 to 100145474 25 + TSS region transcription start site region 104913
Tssr104914 11 100145550 to 100145559 9 + TSS region transcription start site region 104914
Tssr104915 11 100145577 to 100145626 49 + TSS region transcription start site region 104915
Tssr110757 11 100145918 to 100145935 17 - TSS region transcription start site region 110757
Tssr110758 11 100145941 to 100145946 5 - TSS region transcription start site region 110758
Tssr110759 11 100145966 to 100145978 12 - TSS region transcription start site region 110759
Tssr104916 11 100164647 to 100164654 7 + TSS region transcription start site region 104916
Gm39022 11 100166772 to 100181390 14618 + lncRNA gene predicted gene, 39022
Krt9 11 100186781 to 100193246 6465 - protein coding gene keratin 9