Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:99058046-99468085

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57 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm48768 10 99105791 to 99108080 2289 - bidirectional promoter lncRNA gene predicted gene, 48768
Cpgi2152 10 99106703 to 99108467 1764 CpG island CpG island 2152
Poc1b 10 99107036 to 99198074 91038 + protein coding gene POC1 centriolar protein B
Tssr95536 10 99107070 to 99107132 62 + TSS region transcription start site region 95536
Tssr95537 10 99107148 to 99107189 41 + TSS region transcription start site region 95537
Tssr95538 10 99107511 to 99107531 20 + TSS region transcription start site region 95538
Tssr99112 10 99108029 to 99108085 56 - TSS region transcription start site region 99112
Tssr95539 10 99108138 to 99108206 68 + TSS region transcription start site region 95539
Galnt4 10 99108159 to 99113247 5088 + protein coding gene polypeptide N-acetylgalactosaminyltransferase 4
Cpgi2153 10 99109549 to 99109756 207 CpG island CpG island 2153
Tssr99113 10 99117150 to 99117154 4 - TSS region transcription start site region 99113
Phxr2 10 99125167 to 99126325 1158 - protein coding gene per-hexamer repeat gene 2
Tssr99114 10 99132286 to 99132303 17 - TSS region transcription start site region 99114
Tssr99115 10 99132329 to 99132334 5 - TSS region transcription start site region 99115
Tssr99116 10 99132368 to 99132393 25 - TSS region transcription start site region 99116
Tssr99117 10 99132402 to 99132430 28 - TSS region transcription start site region 99117
Gm16239 10 99179184 to 99184610 5426 - antisense lncRNA gene predicted gene 16239
Tssr95540 10 99189486 to 99189495 9 + TSS region transcription start site region 95540
D10Mit244 10 99193124 to 99193246 122 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 244
Gm34574 10 99216442 to 99228906 12464 - lincRNA gene predicted gene, 34574
Tssr99118 10 99232602 to 99232620 18 - TSS region transcription start site region 99118
Gm48884 10 99232794 to 99237616 4822 - lincRNA gene predicted gene, 48884
Gm34777 10 99233074 to 99239013 5939 + lincRNA gene predicted gene, 34777
Tssr95541 10 99233095 to 99233109 14 + TSS region transcription start site region 95541
Tssr99119 10 99241925 to 99241934 9 - TSS region transcription start site region 99119
Tssr99120 10 99241939 to 99241970 31 - TSS region transcription start site region 99120
Cpgi2154 10 99261246 to 99262380 1134 CpG island CpG island 2154
Tssr95542 10 99261551 to 99261617 66 + TSS region transcription start site region 95542
Tssr99121 10 99261709 to 99261726 17 - TSS region transcription start site region 99121
Tssr95543 10 99261869 to 99261891 22 + TSS region transcription start site region 95543
Cpgi2155 10 99262857 to 99264697 1840 CpG island CpG island 2155
Tssr99122 10 99263046 to 99263085 39 - TSS region transcription start site region 99122
Tssr95544 10 99263224 to 99263240 16 + TSS region transcription start site region 95544
Dusp6 10 99263231 to 99267489 4258 + protein coding gene dual specificity phosphatase 6
Tssr95545 10 99263294 to 99263314 20 + TSS region transcription start site region 95545
Tssr95546 10 99266124 to 99266150 26 + TSS region transcription start site region 95546
Tssr95547 10 99267198 to 99267202 4 + TSS region transcription start site region 95547
Gm34921 10 99267686 to 99270446 2760 - lincRNA gene predicted gene, 34921
Gm48089 10 99267896 to 99279084 11188 + lincRNA gene predicted gene, 48089
Tssr95548 10 99269973 to 99269977 4 + TSS region transcription start site region 95548
Tssr99123 10 99270442 to 99270448 6 - TSS region transcription start site region 99123
B530045E10Rik 10 99298888 to 99423047 124159 + lincRNA gene RIKEN cDNA B530045E10 gene
Tssr95549 10 99299089 to 99299093 4 + TSS region transcription start site region 95549
Tssr95550 10 99306612 to 99306617 5 + TSS region transcription start site region 95550
Tssr99124 10 99430823 to 99430831 8 - TSS region transcription start site region 99124
Tssr95551 10 99443699 to 99443733 34 + TSS region transcription start site region 95551
Tssr3335 10 99443869 to 99443878 9 + TSS region transcription start site region 3335
Gad1-ps 10 99444044 to 99445819 1775 + pseudogene glutamate decarboxylase 1, pseudogene
Gm35035 10 99452654 to 99460230 7576 - lincRNA gene predicted gene, 35035
Gm34983 10 99459689 to 99488610 28921 + lincRNA gene predicted gene, 34983
Tssr99125 10 99460222 to 99460239 17 - TSS region transcription start site region 99125
Tssr99126 10 99461580 to 99461605 25 - TSS region transcription start site region 99126
Tssr99127 10 99461752 to 99461763 11 - TSS region transcription start site region 99127
Tssr3336 10 99463204 to 99463214 10 + TSS region transcription start site region 3336
Tssr3337 10 99467276 to 99467298 22 - TSS region transcription start site region 3337
Tssr99128 10 99467308 to 99467386 78 - TSS region transcription start site region 99128
Tssr99129 10 99467662 to 99467674 12 - TSS region transcription start site region 99129