Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:9873943-10302295

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Stxbp5 10 9755547 to 9901079 145532 - protein coding gene syntaxin binding protein 5 (tomosyn)
Tssr92340 10 9882208 to 9882210 2 + TSS region transcription start site region 92340
Tssr96677 10 9886707 to 9886725 18 - TSS region transcription start site region 96677
Tssr96678 10 9898323 to 9898328 5 - TSS region transcription start site region 96678
Cpgi1290 10 9900294 to 9901683 1389 CpG island CpG island 1290
Tssr96679 10 9901160 to 9901250 90 - TSS region transcription start site region 96679
Tssr92341 10 9901290 to 9901303 13 + TSS region transcription start site region 92341
Gm46210 10 9901313 to 9918843 17530 + lincRNA gene predicted gene, 46210
Tssr3135 10 9976643 to 9976665 22 + TSS region transcription start site region 3135
Tssr96680 10 9996303 to 9996307 4 - TSS region transcription start site region 96680
Gm48282 10 10040920 to 10041426 506 + pseudogene predicted gene, 48282
Gm48278 10 10083943 to 10092295 8352 + lincRNA gene predicted gene, 48278
Gm48281 10 10100420 to 10110099 9679 - lincRNA gene predicted gene, 48281
Gm25682 10 10100953 to 10101116 163 + snRNA gene predicted gene, 25682
Gm48279 10 10122486 to 10126891 4405 + lincRNA gene predicted gene, 48279
Gm48280 10 10131272 to 10131640 368 + pseudogene predicted gene, 48280
Gm28905 10 10168619 to 9975947 -192672 + lincRNA gene predicted gene 28905
Tssr92342 10 10184591 to 10184614 23 + TSS region transcription start site region 92342
Gm44555 10 10193524 to 10193671 147 + pseudogene predicted gene 44555
Tssr3136 10 10203121 to 10203125 4 + TSS region transcription start site region 3136
Gm31904 10 10230736 to 10234850 4114 - lincRNA gene predicted gene, 31904
Sysbp1 10 10232521 to 87565233 77332712 QTL systolic blood pressure 1
D10Mit123 10 10232521 to 10232663 142 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 123
Tssr96681 10 10234828 to 10234837 9 - TSS region transcription start site region 96681
Tssr96682 10 10234844 to 10234854 10 - TSS region transcription start site region 96682
Tssr96683 10 10234873 to 10234882 9 - TSS region transcription start site region 96683
Tssr96684 10 10234908 to 10234915 7 - TSS region transcription start site region 96684
Tssr92343 10 10234968 to 10234974 6 + TSS region transcription start site region 92343
4930598N05Rik 10 10234974 to 10258698 23724 + lncRNA gene RIKEN cDNA 4930598N05 gene
Tssr92344 10 10234987 to 10234994 7 + TSS region transcription start site region 92344
Tssr92345 10 10234998 to 10235023 25 + TSS region transcription start site region 92345
Gm48324 10 10270402 to 10296929 26527 - lincRNA gene predicted gene, 48324
Tssr96685 10 10296922 to 10296935 13 - TSS region transcription start site region 96685
Tssr96686 10 10296962 to 10296967 5 - TSS region transcription start site region 96686