Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:97277145-98017156

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87 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm34114 10 97388758 to 97428583 39825 - lncRNA gene predicted gene, 34114
Tssr95441 10 97393472 to 97393496 24 + TSS region transcription start site region 95441
Mir3966 10 97423478 to 97423562 84 + miRNA gene microRNA 3966
Tssr95442 10 97479419 to 97479432 13 + TSS region transcription start site region 95442
Tssr95443 10 97479436 to 97479463 27 + TSS region transcription start site region 95443
Tssr95444 10 97479470 to 97479481 11 + TSS region transcription start site region 95444
Tssr95445 10 97479603 to 97479617 14 + TSS region transcription start site region 95445
Dcn 10 97479609 to 97518143 38534 + protein coding gene decorin
Tssr95446 10 97479625 to 97479650 25 + TSS region transcription start site region 95446
Tssr95447 10 97479722 to 97479750 28 + TSS region transcription start site region 95447
Tssr95448 10 97480214 to 97480227 13 + TSS region transcription start site region 95448
Tssr95449 10 97482361 to 97482372 11 + TSS region transcription start site region 95449
Tssr95450 10 97482390 to 97482404 14 + TSS region transcription start site region 95450
Tssr95451 10 97482419 to 97482455 36 + TSS region transcription start site region 95451
Tssr95452 10 97483337 to 97483347 10 + TSS region transcription start site region 95452
Tssr95453 10 97483364 to 97483377 13 + TSS region transcription start site region 95453
Tssr95454 10 97483388 to 97483396 8 + TSS region transcription start site region 95454
Tssr95455 10 97483407 to 97483416 9 + TSS region transcription start site region 95455
Tssr95456 10 97483424 to 97483443 19 + TSS region transcription start site region 95456
Tssr95457 10 97483453 to 97483475 22 + TSS region transcription start site region 95457
Tssr95458 10 97483476 to 97483479 3 + TSS region transcription start site region 95458
Tssr95459 10 97483481 to 97483515 34 + TSS region transcription start site region 95459
Tssr95460 10 97495011 to 97495041 30 + TSS region transcription start site region 95460
Tssr95461 10 97503807 to 97503810 3 + TSS region transcription start site region 95461
Tssr95462 10 97506481 to 97506512 31 + TSS region transcription start site region 95462
Tssr95463 10 97506534 to 97506547 13 + TSS region transcription start site region 95463
Tssr95464 10 97506553 to 97506584 31 + TSS region transcription start site region 95464
Tssr3333 10 97506601 to 97506608 7 + TSS region transcription start site region 3333
Tssr95465 10 97506660 to 97506670 10 + TSS region transcription start site region 95465
Tssr95466 10 97507705 to 97507717 12 + TSS region transcription start site region 95466
Tssr95467 10 97507753 to 97507769 16 + TSS region transcription start site region 95467
Tssr3334 10 97509951 to 97510026 75 + TSS region transcription start site region 3334
Tssr95468 10 97513593 to 97513619 26 + TSS region transcription start site region 95468
Tssr95469 10 97517451 to 97517469 18 + TSS region transcription start site region 95469
Tssr95470 10 97517494 to 97517506 12 + TSS region transcription start site region 95470
Tssr95471 10 97517516 to 97517528 12 + TSS region transcription start site region 95471
Tssr95472 10 97517547 to 97517570 23 + TSS region transcription start site region 95472
Tssr95473 10 97517581 to 97517594 13 + TSS region transcription start site region 95473
Tssr95474 10 97517609 to 97517629 20 + TSS region transcription start site region 95474
Tssr95475 10 97517640 to 97517651 11 + TSS region transcription start site region 95475
Tssr95476 10 97517660 to 97517673 13 + TSS region transcription start site region 95476
Tssr95477 10 97517680 to 97517691 11 + TSS region transcription start site region 95477
Tssr95478 10 97518007 to 97518041 34 + TSS region transcription start site region 95478
Tssr95479 10 97565415 to 97565431 16 + TSS region transcription start site region 95479
Tssr95480 10 97565436 to 97565546 110 + TSS region transcription start site region 95480
Lum 10 97565501 to 97572703 7202 + protein coding gene lumican
Tssr95481 10 97565552 to 97565564 12 + TSS region transcription start site region 95481
Tssr95482 10 97565578 to 97565597 19 + TSS region transcription start site region 95482
Tssr95483 10 97565636 to 97565671 35 + TSS region transcription start site region 95483
Tssr95484 10 97565682 to 97565695 13 + TSS region transcription start site region 95484
Tssr95485 10 97565756 to 97565774 18 + TSS region transcription start site region 95485
Tssr95486 10 97565778 to 97565820 42 + TSS region transcription start site region 95486
Tssr95487 10 97568061 to 97568091 30 + TSS region transcription start site region 95487
Tssr95488 10 97568353 to 97568381 28 + TSS region transcription start site region 95488
4930473O22Rik 10 97590984 to 97596931 5947 - lincRNA gene RIKEN cDNA 4930473O22 gene
Tssr99098 10 97596932 to 97596942 10 - TSS region transcription start site region 99098
Tssr95489 10 97606865 to 97606900 35 + TSS region transcription start site region 95489
Kera 10 97606955 to 97613688 6733 + protein coding gene keratocan
Tssr95490 10 97607103 to 97607115 12 + TSS region transcription start site region 95490
Tssr95491 10 97607166 to 97607244 78 + TSS region transcription start site region 95491
Tssr95492 10 97607250 to 97607261 11 + TSS region transcription start site region 95492
Tssr95493 10 97607291 to 97607338 47 + TSS region transcription start site region 95493
Tssr95494 10 97613255 to 97613257 2 + TSS region transcription start site region 95494
Gm40749 10 97620168 to 97623256 3088 - lncRNA gene predicted gene, 40749
D10Ertd126e 10 97626554 to 97626801 247 DNA segment DNA segment, Chr 10, ERATO Doi 126, expressed
Tssr99099 10 97644047 to 97644057 10 - TSS region transcription start site region 99099
Tssr99100 10 97644063 to 97644070 7 - TSS region transcription start site region 99100
Epyc 10 97644068 to 97681900 37832 + protein coding gene epiphycan
Tssr95495 10 97646985 to 97646998 13 + TSS region transcription start site region 95495
Tssr95496 10 97647084 to 97647113 29 + TSS region transcription start site region 95496
Tssr95497 10 97647119 to 97647130 11 + TSS region transcription start site region 95497
Tssr95498 10 97647145 to 97647156 11 + TSS region transcription start site region 95498
Tssr95499 10 97647406 to 97647436 30 + TSS region transcription start site region 95499
Tssr95500 10 97649818 to 97649825 7 + TSS region transcription start site region 95500
Tssr95501 10 97674741 to 97674750 9 + TSS region transcription start site region 95501
Gm10754 10 97681414 to 97967090 285676 - lincRNA gene predicted gene 10754
Tssr95502 10 97693020 to 97693029 9 + TSS region transcription start site region 95502
Cpgi2150 10 97693032 to 97694223 1191 CpG island CpG island 2150
Tssr95503 10 97693053 to 97693061 8 + TSS region transcription start site region 95503
Ccer1 10 97693059 to 97694923 1864 + protein coding gene coiled-coil glutamate-rich protein 1
Tssr95504 10 97714734 to 97714751 17 + TSS region transcription start site region 95504
Tssr95505 10 97714767 to 97714789 22 + TSS region transcription start site region 95505
4930525C09Rik 10 97714772 to 97753702 38930 + lincRNA gene RIKEN cDNA 4930525C09 gene
C030005K15Rik 10 97724874 to 97726755 1881 - unclassified gene RIKEN cDNA C030005K15 gene
D10Mit97 10 97738104 to 97738246 142 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 97
Gm25658 10 97744757 to 97744884 127 - snoRNA gene predicted gene, 25658
D10Mit120 10 97932688 to 97932818 130 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 120