MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 10:9701707-10071725

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr92339	10	9732555 to 9732558	3	+	TSS region	transcription start site region 92339
Gm19161	10	9748447 to 9749180	733	-	pseudogene	predicted gene, 19161
Stxbp5	10	9755547 to 9901079	145532	-	protein coding gene	syntaxin binding protein 5 (tomosyn)
Tssr96675	10	9782828 to 9782831	3	-	TSS region	transcription start site region 96675
Cpgi1289	10	9797964 to 9798194	230		CpG island	CpG island 1289
Tssr96676	10	9811992 to 9812034	42	-	TSS region	transcription start site region 96676
Tssr3134	10	9833635 to 9833637	2	+	TSS region	transcription start site region 3134
Gm25635	10	9852019 to 9852149	130	-	snoRNA gene	predicted gene, 25635
Tssr92340	10	9882208 to 9882210	2	+	TSS region	transcription start site region 92340
Tssr96677	10	9886707 to 9886725	18	-	TSS region	transcription start site region 96677
Tssr96678	10	9898323 to 9898328	5	-	TSS region	transcription start site region 96678
Cpgi1290	10	9900294 to 9901683	1389		CpG island	CpG island 1290
Tssr96679	10	9901160 to 9901250	90	-	TSS region	transcription start site region 96679
Tssr92341	10	9901290 to 9901303	13	+	TSS region	transcription start site region 92341
Gm46210	10	9901313 to 9918843	17530	+	lincRNA gene	predicted gene, 46210
Tssr3135	10	9976643 to 9976665	22	+	TSS region	transcription start site region 3135
Tssr96680	10	9996303 to 9996307	4	-	TSS region	transcription start site region 96680
Gm48282	10	10040920 to 10041426	506	+	pseudogene	predicted gene, 48282
Gm28905	10	10168619 to 9975947	-192672	+	lincRNA gene	predicted gene 28905