Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:96146696-96636719

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63 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr99075 10 96163276 to 96163291 15 - TSS region transcription start site region 99075
Tssr99076 10 96163418 to 96163428 10 - TSS region transcription start site region 99076
Tssr95411 10 96163559 to 96163561 2 + TSS region transcription start site region 95411
Gm22913 10 96164331 to 96164431 100 + miRNA gene predicted gene, 22913
Tssr95412 10 96173231 to 96173250 19 + TSS region transcription start site region 95412
Tssr99077 10 96176619 to 96176623 4 - TSS region transcription start site region 99077
Gm40746 10 96180918 to 96182695 1777 + lncRNA gene predicted gene, 40746
Tssr99078 10 96181504 to 96181509 5 - TSS region transcription start site region 99078
Tssr99079 10 96181533 to 96181544 11 - TSS region transcription start site region 99079
Tssr95413 10 96181664 to 96181682 18 + TSS region transcription start site region 95413
Tssr95414 10 96181690 to 96181716 26 + TSS region transcription start site region 95414
Tssr95415 10 96181807 to 96181811 4 + TSS region transcription start site region 95415
Tssr99080 10 96185720 to 96185726 6 - TSS region transcription start site region 99080
Tssr95416 10 96185956 to 96185968 12 + TSS region transcription start site region 95416
Tssr95417 10 96186205 to 96186245 40 + TSS region transcription start site region 95417
Cpgi2147 10 96215622 to 96215811 189 CpG island CpG island 2147
4930459C07Rik 10 96226207 to 96248708 22501 + lincRNA gene RIKEN cDNA 4930459C07 gene
Gm40747 10 96226325 to 96258908 32583 - lncRNA gene predicted gene, 40747
Tssr95418 10 96227810 to 96227826 16 + TSS region transcription start site region 95418
Tssr99081 10 96263697 to 96263732 35 - TSS region transcription start site region 99081
Tssr95419 10 96266631 to 96266640 9 + TSS region transcription start site region 95419
Tssr95420 10 96280569 to 96280583 14 + TSS region transcription start site region 95420
D10Mit291 10 96295775 to 96295899 124 DNA segment DNA Segment, Chr 10 Massachusetts Institute of Technology 291
Gm40748 10 96305501 to 96308732 3231 - lncRNA gene predicted gene, 40748
Tssr99082 10 96306927 to 96306938 11 - TSS region transcription start site region 99082
Gm48427 10 96309345 to 96320725 11380 + lincRNA gene predicted gene, 48427
Gm33782 10 96310131 to 96362367 52236 + lincRNA gene predicted gene, 33782
Tssr99083 10 96332944 to 96332957 13 - TSS region transcription start site region 99083
Tssr99084 10 96332959 to 96332968 9 - TSS region transcription start site region 99084
Gm48428 10 96336090 to 96345824 9734 - lincRNA gene predicted gene, 48428
Tssr99085 10 96370766 to 96370805 39 - TSS region transcription start site region 99085
Tssr99086 10 96370827 to 96370840 13 - TSS region transcription start site region 99086
Tssr95421 10 96371210 to 96371241 31 + TSS region transcription start site region 95421
Tssr95422 10 96371262 to 96371270 8 + TSS region transcription start site region 95422
Tssr95423 10 96371283 to 96371296 13 + TSS region transcription start site region 95423
Tssr95424 10 96371318 to 96371327 9 + TSS region transcription start site region 95424
Cpgi2148 10 96371413 to 96371659 246 CpG island CpG island 2148
Tssr99087 10 96374207 to 96374231 24 - TSS region transcription start site region 99087
Tssr99088 10 96391696 to 96391719 23 - TSS region transcription start site region 99088
Tssr95425 10 96398783 to 96398793 10 + TSS region transcription start site region 95425
Tssr95426 10 96398810 to 96398823 13 + TSS region transcription start site region 95426
Tssr99089 10 96400772 to 96400777 5 - TSS region transcription start site region 99089
Tssr95427 10 96401056 to 96401068 12 + TSS region transcription start site region 95427
Tssr95428 10 96401095 to 96401104 9 + TSS region transcription start site region 95428
Gm20091 10 96408850 to 96409038 188 - pseudogene predicted gene, 20091
Gm8601 10 96476479 to 96477387 908 + pseudogene predicted gene 8601
Gm48505 10 96495721 to 96523982 28261 - lincRNA gene predicted gene, 48505
Tssr99090 10 96523963 to 96523992 29 - TSS region transcription start site region 99090
Gm33843 10 96524424 to 96598745 74321 - lincRNA gene predicted gene, 33843
D10Mit275 10 96524699 to 96524847 148 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology-275
Tssr99091 10 96595609 to 96595617 8 - TSS region transcription start site region 99091
Cpgi2149 10 96616396 to 96618332 1936 CpG island CpG island 2149
Tssr99092 10 96616634 to 96616666 32 - TSS region transcription start site region 99092
Tssr95429 10 96616998 to 96617015 17 + TSS region transcription start site region 95429
Btg1 10 96617006 to 96622809 5803 + protein coding gene B cell translocation gene 1, anti-proliferative
Tssr3332 10 96617546 to 96617557 11 + TSS region transcription start site region 3332
Tssr95430 10 96618763 to 96618782 19 + TSS region transcription start site region 95430
Tssr95431 10 96620861 to 96620874 13 + TSS region transcription start site region 95431
Tssr95432 10 96621194 to 96621208 14 + TSS region transcription start site region 95432
Tssr99093 10 96621263 to 96621271 8 - TSS region transcription start site region 99093
Tssr95433 10 96621386 to 96621395 9 + TSS region transcription start site region 95433
Tssr95434 10 96621894 to 96621906 12 + TSS region transcription start site region 95434
Tssr95435 10 96630007 to 96630011 4 + TSS region transcription start site region 95435