Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:96102959-96562968

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D10Mit119 10 96106200 to 96106342 142 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 119
Gm48425 10 96127985 to 96129742 1757 - pseudogene predicted gene, 48425
Gm5426 10 96136603 to 96136914 311 + pseudogene predicted pseudogene 5426
Tssr99075 10 96163276 to 96163291 15 - TSS region transcription start site region 99075
Tssr99076 10 96163418 to 96163428 10 - TSS region transcription start site region 99076
Tssr95411 10 96163559 to 96163561 2 + TSS region transcription start site region 95411
Gm22913 10 96164331 to 96164431 100 + miRNA gene predicted gene, 22913
Tssr95412 10 96173231 to 96173250 19 + TSS region transcription start site region 95412
Tssr99077 10 96176619 to 96176623 4 - TSS region transcription start site region 99077
Gm40746 10 96180918 to 96182695 1777 + lncRNA gene predicted gene, 40746
Tssr99078 10 96181504 to 96181509 5 - TSS region transcription start site region 99078
Tssr99079 10 96181533 to 96181544 11 - TSS region transcription start site region 99079
Tssr95413 10 96181664 to 96181682 18 + TSS region transcription start site region 95413
Tssr95414 10 96181690 to 96181716 26 + TSS region transcription start site region 95414
Tssr95415 10 96181807 to 96181811 4 + TSS region transcription start site region 95415
Tssr99080 10 96185720 to 96185726 6 - TSS region transcription start site region 99080
Tssr95416 10 96185956 to 96185968 12 + TSS region transcription start site region 95416
Tssr95417 10 96186205 to 96186245 40 + TSS region transcription start site region 95417
Cpgi2147 10 96215622 to 96215811 189 CpG island CpG island 2147
4930459C07Rik 10 96226207 to 96248708 22501 + lincRNA gene RIKEN cDNA 4930459C07 gene
Gm40747 10 96226325 to 96258908 32583 - lncRNA gene predicted gene, 40747
Tssr95418 10 96227810 to 96227826 16 + TSS region transcription start site region 95418
Tssr99081 10 96263697 to 96263732 35 - TSS region transcription start site region 99081
Tssr95419 10 96266631 to 96266640 9 + TSS region transcription start site region 95419
Tssr95420 10 96280569 to 96280583 14 + TSS region transcription start site region 95420
D10Mit291 10 96295775 to 96295899 124 DNA segment DNA Segment, Chr 10 Massachusetts Institute of Technology 291
Gm40748 10 96305501 to 96308732 3231 - lncRNA gene predicted gene, 40748
Tssr99082 10 96306927 to 96306938 11 - TSS region transcription start site region 99082
Gm48427 10 96309345 to 96320725 11380 + lincRNA gene predicted gene, 48427
Gm33782 10 96310131 to 96362367 52236 + lincRNA gene predicted gene, 33782
Tssr99083 10 96332944 to 96332957 13 - TSS region transcription start site region 99083
Tssr99084 10 96332959 to 96332968 9 - TSS region transcription start site region 99084
Gm48428 10 96336090 to 96345824 9734 - lincRNA gene predicted gene, 48428
Tssr99085 10 96370766 to 96370805 39 - TSS region transcription start site region 99085
Tssr99086 10 96370827 to 96370840 13 - TSS region transcription start site region 99086
Tssr95421 10 96371210 to 96371241 31 + TSS region transcription start site region 95421
Tssr95422 10 96371262 to 96371270 8 + TSS region transcription start site region 95422
Tssr95423 10 96371283 to 96371296 13 + TSS region transcription start site region 95423
Tssr95424 10 96371318 to 96371327 9 + TSS region transcription start site region 95424
Cpgi2148 10 96371413 to 96371659 246 CpG island CpG island 2148
Tssr99087 10 96374207 to 96374231 24 - TSS region transcription start site region 99087
Tssr99088 10 96391696 to 96391719 23 - TSS region transcription start site region 99088
Tssr95425 10 96398783 to 96398793 10 + TSS region transcription start site region 95425
Tssr95426 10 96398810 to 96398823 13 + TSS region transcription start site region 95426
Tssr99089 10 96400772 to 96400777 5 - TSS region transcription start site region 99089
Tssr95427 10 96401056 to 96401068 12 + TSS region transcription start site region 95427
Tssr95428 10 96401095 to 96401104 9 + TSS region transcription start site region 95428
Gm20091 10 96408850 to 96409038 188 - pseudogene predicted gene, 20091
Gm8601 10 96476479 to 96477387 908 + pseudogene predicted gene 8601
Gm48505 10 96495721 to 96523982 28261 - lincRNA gene predicted gene, 48505
Tssr99090 10 96523963 to 96523992 29 - TSS region transcription start site region 99090
Gm33843 10 96524424 to 96598745 74321 - lincRNA gene predicted gene, 33843
D10Mit275 10 96524699 to 96524847 148 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology-275