Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:9579722-9796909

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm48758 10 9587602 to 9588114 512 - pseudogene predicted gene, 48758
Gm48759 10 9596472 to 9599423 2951 + lincRNA gene predicted gene, 48759
Samd5 10 9622936 to 9675208 52272 - protein coding gene sterile alpha motif domain containing 5
5830408B19Rik 10 9622943 to 9624848 1905 unclassified gene RIKEN cDNA 5830408B19 gene
Tssr96670 10 9649717 to 9649733 16 - TSS region transcription start site region 96670
Gm48760 10 9667676 to 9668176 500 + pseudogene predicted gene, 48760
Cpgi1287 10 9674367 to 9676148 1781 CpG island CpG island 1287
Tssr96671 10 9675163 to 9675243 80 - TSS region transcription start site region 96671
Tssr96672 10 9675399 to 9675416 17 - TSS region transcription start site region 96672
Tssr96673 10 9675799 to 9675819 20 - TSS region transcription start site region 96673
Tssr96674 10 9675825 to 9675847 22 - TSS region transcription start site region 96674
Cpgi1288 10 9683786 to 9684001 215 CpG island CpG island 1288
Gm6150 10 9684722 to 9691909 7187 + lncRNA gene predicted gene 6150
Gm31471 10 9694841 to 9699214 4373 - lncRNA gene predicted gene, 31471
Tssr92339 10 9732555 to 9732558 3 + TSS region transcription start site region 92339
Gm19161 10 9748447 to 9749180 733 - pseudogene predicted gene, 19161
Stxbp5 10 9755547 to 9901079 145532 - protein coding gene syntaxin binding protein 5 (tomosyn)
Tssr96675 10 9782828 to 9782831 3 - TSS region transcription start site region 96675