Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:95734572-96344583

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96 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm47708 10 95730183 to 95739356 9173 + lincRNA gene predicted gene, 47708
Tssr95376 10 95746066 to 95746092 26 + TSS region transcription start site region 95376
Tssr3330 10 95766829 to 95766854 25 + TSS region transcription start site region 3330
Tssr99062 10 95767759 to 95767774 15 - TSS region transcription start site region 99062
Tssr99063 10 95768069 to 95768087 18 - TSS region transcription start site region 99063
4732465J04Rik 10 95773133 to 95794984 21851 + lincRNA gene RIKEN cDNA 4732465J04 gene
Tssr99064 10 95773644 to 95773661 17 - TSS region transcription start site region 99064
Tssr95377 10 95773830 to 95773835 5 + TSS region transcription start site region 95377
Tssr95378 10 95778901 to 95778927 26 + TSS region transcription start site region 95378
Tssr99065 10 95778945 to 95778982 37 - TSS region transcription start site region 99065
Tssr95379 10 95778948 to 95778955 7 + TSS region transcription start site region 95379
Tssr99066 10 95779704 to 95779715 11 - TSS region transcription start site region 99066
Tssr95380 10 95779980 to 95779991 11 + TSS region transcription start site region 95380
Tssr95381 10 95782652 to 95782682 30 + TSS region transcription start site region 95381
Tssr95382 10 95801211 to 95801213 2 + TSS region transcription start site region 95382
Tssr3331 10 95808916 to 95808917 1 - TSS region transcription start site region 3331
Gm47718 10 95811337 to 95817895 6558 - lincRNA gene predicted gene, 47718
Gm33377 10 95817321 to 95896811 79490 + lncRNA gene predicted gene, 33377
Gm47719 10 95817570 to 95849118 31548 + lincRNA gene predicted gene, 47719
Gm33543 10 95823973 to 95842930 18957 - lncRNA gene predicted gene, 33543
Tssr99067 10 95825151 to 95825155 4 - TSS region transcription start site region 99067
Tssr99068 10 95842886 to 95842893 7 - TSS region transcription start site region 99068
Tssr99069 10 95842904 to 95842915 11 - TSS region transcription start site region 99069
Tssr99070 10 95842924 to 95842946 22 - TSS region transcription start site region 99070
Gm47724 10 95870483 to 95870799 316 - pseudogene predicted gene, 47724
Tssr95383 10 95892512 to 95892528 16 + TSS region transcription start site region 95383
Gm47725 10 95893443 to 95897257 3814 + lincRNA gene predicted gene, 47725
Tssr95384 10 95893481 to 95893508 27 + TSS region transcription start site region 95384
Gm24433 10 95898603 to 95898735 132 + snoRNA gene predicted gene, 24433
Cpgi2145 10 95940243 to 95941469 1226 CpG island CpG island 2145
Eea1 10 95940661 to 96045518 104857 + protein coding gene early endosome antigen 1
Tssr95385 10 95940681 to 95940703 22 + TSS region transcription start site region 95385
Tssr95386 10 95940704 to 95940772 68 + TSS region transcription start site region 95386
Tssr95387 10 95940858 to 95940875 17 + TSS region transcription start site region 95387
Tssr95388 10 95941054 to 95941071 17 + TSS region transcription start site region 95388
Tssr95389 10 95943438 to 95943443 5 + TSS region transcription start site region 95389
Tssr95390 10 95970854 to 95970863 9 + TSS region transcription start site region 95390
Tssr95391 10 95970914 to 95970923 9 + TSS region transcription start site region 95391
Tssr95392 10 95973989 to 95974002 13 + TSS region transcription start site region 95392
Tssr95393 10 95980322 to 95980334 12 + TSS region transcription start site region 95393
Tssr95394 10 95980340 to 95980355 15 + TSS region transcription start site region 95394
Tssr95395 10 95989558 to 95989573 15 + TSS region transcription start site region 95395
Tssr95396 10 95990278 to 95990287 9 + TSS region transcription start site region 95396
Tssr95397 10 95991371 to 95991383 12 + TSS region transcription start site region 95397
Tssr95398 10 95991604 to 95991626 22 + TSS region transcription start site region 95398
Tssr95399 10 95993420 to 95993433 13 + TSS region transcription start site region 95399
Tssr95400 10 96002902 to 96002922 20 + TSS region transcription start site region 95400
Tssr95401 10 96012120 to 96012129 9 + TSS region transcription start site region 95401
Tssr95402 10 96019861 to 96019872 11 + TSS region transcription start site region 95402
Tssr95403 10 96023969 to 96023980 11 + TSS region transcription start site region 95403
Tssr95404 10 96026704 to 96026723 19 + TSS region transcription start site region 95404
Tssr95405 10 96028427 to 96028439 12 + TSS region transcription start site region 95405
Tssr95406 10 96036667 to 96036683 16 + TSS region transcription start site region 95406
Tssr95407 10 96037418 to 96037453 35 + TSS region transcription start site region 95407
Tssr95408 10 96039572 to 96039583 11 + TSS region transcription start site region 95408
Tssr95409 10 96044519 to 96044529 10 + TSS region transcription start site region 95409
Gm49817 10 96047628 to 96096005 48377 - pseudogene predicted gene, 49817
Cpgi2146 10 96077528 to 96077679 151 CpG island CpG island 2146
Tssr99071 10 96077560 to 96077585 25 - TSS region transcription start site region 99071
Tssr99072 10 96077741 to 96077747 6 - TSS region transcription start site region 99072
Tssr99073 10 96077808 to 96077826 18 - TSS region transcription start site region 99073
Tssr99074 10 96077886 to 96077897 11 - TSS region transcription start site region 99074
Tssr95410 10 96094369 to 96094382 13 + TSS region transcription start site region 95410
D10Mit119 10 96106200 to 96106342 142 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 119
Gm48425 10 96127985 to 96129742 1757 - pseudogene predicted gene, 48425
Gm5426 10 96136603 to 96136914 311 + pseudogene predicted pseudogene 5426
Tssr99075 10 96163276 to 96163291 15 - TSS region transcription start site region 99075
Tssr99076 10 96163418 to 96163428 10 - TSS region transcription start site region 99076
Tssr95411 10 96163559 to 96163561 2 + TSS region transcription start site region 95411
Gm22913 10 96164331 to 96164431 100 + miRNA gene predicted gene, 22913
Tssr95412 10 96173231 to 96173250 19 + TSS region transcription start site region 95412
Tssr99077 10 96176619 to 96176623 4 - TSS region transcription start site region 99077
Gm40746 10 96180918 to 96182695 1777 + lncRNA gene predicted gene, 40746
Tssr99078 10 96181504 to 96181509 5 - TSS region transcription start site region 99078
Tssr99079 10 96181533 to 96181544 11 - TSS region transcription start site region 99079
Tssr95413 10 96181664 to 96181682 18 + TSS region transcription start site region 95413
Tssr95414 10 96181690 to 96181716 26 + TSS region transcription start site region 95414
Tssr95415 10 96181807 to 96181811 4 + TSS region transcription start site region 95415
Tssr99080 10 96185720 to 96185726 6 - TSS region transcription start site region 99080
Tssr95416 10 96185956 to 96185968 12 + TSS region transcription start site region 95416
Tssr95417 10 96186205 to 96186245 40 + TSS region transcription start site region 95417
Cpgi2147 10 96215622 to 96215811 189 CpG island CpG island 2147
4930459C07Rik 10 96226207 to 96248708 22501 + lincRNA gene RIKEN cDNA 4930459C07 gene
Gm40747 10 96226325 to 96258908 32583 - lncRNA gene predicted gene, 40747
Tssr95418 10 96227810 to 96227826 16 + TSS region transcription start site region 95418
Tssr99081 10 96263697 to 96263732 35 - TSS region transcription start site region 99081
Tssr95419 10 96266631 to 96266640 9 + TSS region transcription start site region 95419
Tssr95420 10 96280569 to 96280583 14 + TSS region transcription start site region 95420
D10Mit291 10 96295775 to 96295899 124 DNA segment DNA Segment, Chr 10 Massachusetts Institute of Technology 291
Gm40748 10 96305501 to 96308732 3231 - lncRNA gene predicted gene, 40748
Tssr99082 10 96306927 to 96306938 11 - TSS region transcription start site region 99082
Gm48427 10 96309345 to 96320725 11380 + lincRNA gene predicted gene, 48427
Gm33782 10 96310131 to 96362367 52236 + lincRNA gene predicted gene, 33782
Tssr99083 10 96332944 to 96332957 13 - TSS region transcription start site region 99083
Tssr99084 10 96332959 to 96332968 9 - TSS region transcription start site region 99084
Gm48428 10 96336090 to 96345824 9734 - lincRNA gene predicted gene, 48428