Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:95399231-95719321

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74 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Socs2 10 95385362 to 95417180 31818 - protein coding gene suppressor of cytokine signaling 2
Tssr3329 10 95409029 to 95409032 3 + TSS region transcription start site region 3329
Tssr95356 10 95411762 to 95411776 14 + TSS region transcription start site region 95356
Tssr95357 10 95412026 to 95412048 22 + TSS region transcription start site region 95357
Gm33230 10 95413117 to 95414603 1486 + lncRNA gene predicted gene, 33230
Tssr99030 10 95413593 to 95413601 8 - TSS region transcription start site region 99030
Cpgi2139 10 95414306 to 95417694 3388 CpG island CpG island 2139
Tssr99031 10 95415194 to 95415220 26 - TSS region transcription start site region 99031
Tssr99032 10 95415285 to 95415297 12 - TSS region transcription start site region 99032
Tssr99033 10 95415465 to 95415483 18 - TSS region transcription start site region 99033
Tssr99034 10 95415497 to 95415511 14 - TSS region transcription start site region 99034
Tssr95358 10 95415591 to 95415627 36 + TSS region transcription start site region 95358
Tssr99035 10 95415973 to 95416006 33 - TSS region transcription start site region 99035
Tssr99036 10 95416007 to 95416035 28 - TSS region transcription start site region 99036
Tssr99037 10 95416716 to 95416732 16 - TSS region transcription start site region 99037
Tssr99038 10 95416780 to 95416834 54 - TSS region transcription start site region 99038
Tssr99039 10 95416850 to 95416861 11 - TSS region transcription start site region 99039
Tssr95359 10 95416983 to 95416993 10 + TSS region transcription start site region 95359
Tssr99040 10 95417040 to 95417077 37 - TSS region transcription start site region 99040
Tssr99041 10 95417099 to 95417110 11 - TSS region transcription start site region 99041
Tssr95360 10 95417235 to 95417267 32 + TSS region transcription start site region 95360
Tssr99042 10 95417250 to 95417269 19 - TSS region transcription start site region 99042
Tssr95361 10 95417352 to 95417385 33 + TSS region transcription start site region 95361
5730420D15Rik 10 95417375 to 95428640 11265 + bidirectional promoter lncRNA gene RIKEN cDNA 5730420D15 gene
Tssr95362 10 95418682 to 95418687 5 + TSS region transcription start site region 95362
Gm47599 10 95445316 to 95461224 15908 - lincRNA gene predicted gene, 47599
Tssr99043 10 95447961 to 95447970 9 - TSS region transcription start site region 99043
Tssr99044 10 95447973 to 95448006 33 - TSS region transcription start site region 99044
Gm47600 10 95454672 to 95454966 294 - pseudogene predicted gene, 47600
Tssr95363 10 95456490 to 95456505 15 + TSS region transcription start site region 95363
Cpgi2140 10 95466825 to 95467066 241 CpG island CpG island 2140
Gm3619 10 95477343 to 95478117 774 - pseudogene predicted gene 3619
Mrpl42 10 95480805 to 95501940 21135 - protein coding gene mitochondrial ribosomal protein L42
Tssr99045 10 95494791 to 95494795 4 - TSS region transcription start site region 99045
Cpgi2141 10 95501612 to 95502136 524 CpG island CpG island 2141
Tssr99046 10 95501921 to 95501953 32 - TSS region transcription start site region 99046
Tssr99047 10 95501957 to 95501966 9 - TSS region transcription start site region 99047
Gm46239 10 95512227 to 95514786 2559 - lncRNA gene predicted gene, 46239
Cpgi2142 10 95514347 to 95516021 1674 CpG island CpG island 2142
Tssr99048 10 95514742 to 95514769 27 - TSS region transcription start site region 99048
Tssr99049 10 95514770 to 95514789 19 - TSS region transcription start site region 99049
Tssr95364 10 95514870 to 95514888 18 + TSS region transcription start site region 95364
Tssr95365 10 95514962 to 95514970 8 + TSS region transcription start site region 95365
Tssr95366 10 95515116 to 95515161 45 + TSS region transcription start site region 95366
Ube2n 10 95515162 to 95545658 30496 + protein coding gene ubiquitin-conjugating enzyme E2N
Tssr95367 10 95515170 to 95515180 10 + TSS region transcription start site region 95367
Tssr95368 10 95523184 to 95523191 7 + TSS region transcription start site region 95368
Tssr95369 10 95527166 to 95527169 3 + TSS region transcription start site region 95369
Siim1 10 95545406 to 95545406 0 QTL stress induced immobility 1
Nudt4 10 95547007 to 95564146 17139 - protein coding gene nudix (nucleoside diphosphate linked moiety X)-type motif 4
Tssr99050 10 95548524 to 95548538 14 - TSS region transcription start site region 99050
Tssr99051 10 95548923 to 95548934 11 - TSS region transcription start site region 99051
Mir3058 10 95559231 to 95559321 90 - miRNA gene microRNA 3058
Cpgi2143 10 95563224 to 95564627 1403 CpG island CpG island 2143
Tssr95370 10 95563866 to 95563871 5 + TSS region transcription start site region 95370
Tssr99052 10 95564021 to 95564028 7 - TSS region transcription start site region 99052
Tssr99053 10 95564034 to 95564062 28 - TSS region transcription start site region 99053
Tssr99054 10 95564065 to 95564091 26 - TSS region transcription start site region 99054
Tssr99055 10 95564099 to 95564121 22 - TSS region transcription start site region 99055
Tssr99056 10 95564135 to 95564154 19 - TSS region transcription start site region 99056
Tssr99057 10 95564173 to 95564181 8 - TSS region transcription start site region 99057
Gm23776 10 95603792 to 95604116 324 + unclassified non-coding RNA gene predicted gene, 23776
Tssr99058 10 95630378 to 95630380 2 - TSS region transcription start site region 99058
Gm33336 10 95630503 to 95632244 1741 - lincRNA gene predicted gene, 33336
Gm47667 10 95634483 to 95636425 1942 + lincRNA gene predicted gene, 47667
Tssr95371 10 95634494 to 95634532 38 + TSS region transcription start site region 95371
Anapc15-ps 10 95672991 to 95673451 460 - pseudogene anaphase prompoting complex C subunit 15, pseudogene
Tssr99059 10 95673464 to 95673485 21 - TSS region transcription start site region 99059
Cpgi2144 10 95680804 to 95680993 189 CpG island CpG island 2144
2310011C19Rik 10 95680806 to 95681123 317 unclassified gene RIKEN cDNA 2310011C19 gene
Gm47669 10 95703051 to 95703462 411 - pseudogene predicted gene, 47669
Tssr95372 10 95708144 to 95708150 6 + TSS region transcription start site region 95372
Gm47671 10 95714001 to 95717507 3506 - lincRNA gene predicted gene, 47671
1110019B22Rik 10 95719133 to 95722500 3367 - lincRNA gene RIKEN cDNA 1110019B22 gene