Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:94846379-95387731

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64 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Plxnc1 10 94790866 to 94944835 153969 - protein coding gene plexin C1
Tssr95348 10 94846980 to 94846984 4 + TSS region transcription start site region 95348
Tssr98999 10 94855481 to 94855502 21 - TSS region transcription start site region 98999
Tssr99000 10 94855556 to 94855573 17 - TSS region transcription start site region 99000
Gm48718 10 94881311 to 94883792 2481 - unclassified gene predicted gene, 48718
Cpgi2130 10 94943386 to 94945564 2178 CpG island CpG island 2130
Tssr99001 10 94943788 to 94943859 71 - TSS region transcription start site region 99001
Tssr99002 10 94943873 to 94943887 14 - TSS region transcription start site region 99002
Tssr99003 10 94944170 to 94944235 65 - TSS region transcription start site region 99003
Tssr99004 10 94944535 to 94944546 11 - TSS region transcription start site region 99004
Tssr99005 10 94944790 to 94944831 41 - TSS region transcription start site region 99005
Tssr99006 10 94944835 to 94944862 27 - TSS region transcription start site region 99006
Tssr99007 10 94944865 to 94944891 26 - TSS region transcription start site region 99007
Tssr99008 10 94944923 to 94944939 16 - TSS region transcription start site region 99008
Tssr99009 10 94944962 to 94944992 30 - TSS region transcription start site region 99009
Gm25266 10 94948590 to 94948893 303 + unclassified non-coding RNA gene predicted gene, 25266
Cpgi2131 10 94950676 to 94950928 252 CpG island CpG island 2131
Tssr99010 10 94950785 to 94950786 1 - TSS region transcription start site region 99010
Tssr99011 10 94961476 to 94961481 5 - TSS region transcription start site region 99011
Gm40744 10 94961637 to 94965244 3607 + lncRNA gene predicted gene, 40744
Tssr95349 10 94961675 to 94961686 11 + TSS region transcription start site region 95349
Cpgi2132 10 94991624 to 94991861 237 CpG island CpG island 2132
Gm48867 10 94993952 to 94999442 5490 - lincRNA gene predicted gene, 48867
D10Mit69 10 95101525 to 95101674 149 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 69
Cpgi2133 10 95110988 to 95111438 450 CpG island CpG island 2133
Gm48868 10 95116379 to 95117731 1352 + unclassified gene predicted gene, 48868
Tssr95350 10 95117891 to 95117896 5 + TSS region transcription start site region 95350
Gm29684 10 95120582 to 95145825 25243 - lincRNA gene predicted gene, 29684
Gm33091 10 95134290 to 95136874 2584 - lincRNA gene predicted gene, 33091
Tssr99012 10 95145398 to 95145414 16 - TSS region transcription start site region 99012
Tssr99013 10 95145535 to 95145547 12 - TSS region transcription start site region 99013
Tssr99014 10 95145801 to 95145815 14 - TSS region transcription start site region 99014
Tssr99015 10 95145828 to 95145847 19 - TSS region transcription start site region 99015
Gm48874 10 95160361 to 95165660 5299 + unclassified gene predicted gene, 48874
Cradd 10 95174746 to 95324133 149387 - protein coding gene CASP2 and RIPK1 domain containing adaptor with death domain
Tssr99016 10 95175993 to 95176025 32 - TSS region transcription start site region 99016
Tssr3328 10 95180323 to 95180347 24 + TSS region transcription start site region 3328
Tssr95351 10 95218017 to 95218028 11 + TSS region transcription start site region 95351
Tssr99017 10 95232706 to 95232709 3 - TSS region transcription start site region 99017
Cpgi2134 10 95251814 to 95252168 354 CpG island CpG island 2134
A630089K24Rik 10 95261228 to 95267012 5784 unclassified gene RIKEN cDNA A630089K24 gene
Cpgi2135 10 95264653 to 95265031 378 CpG island CpG island 2135
Tssr99018 10 95264951 to 95264961 10 - TSS region transcription start site region 99018
Tssr99019 10 95264966 to 95264987 21 - TSS region transcription start site region 99019
Tssr95352 10 95265194 to 95265209 15 + TSS region transcription start site region 95352
Tssr99020 10 95267147 to 95267167 20 - TSS region transcription start site region 99020
Tssr99021 10 95298637 to 95298642 5 - TSS region transcription start site region 99021
Gm48880 10 95312870 to 95314853 1983 - unclassified gene predicted gene, 48880
Gm48882 10 95318247 to 95324358 6111 + antisense lncRNA gene predicted gene, 48882
Tssr95353 10 95318457 to 95318467 10 + TSS region transcription start site region 95353
Tssr95354 10 95319270 to 95319283 13 + TSS region transcription start site region 95354
Tssr95355 10 95319291 to 95319301 10 + TSS region transcription start site region 95355
Tssr99022 10 95319996 to 95320014 18 - TSS region transcription start site region 99022
Tssr99023 10 95322979 to 95322985 6 - TSS region transcription start site region 99023
Cpgi2136 10 95323411 to 95324075 664 CpG island CpG island 2136
Tssr99024 10 95323532 to 95323545 13 - TSS region transcription start site region 99024
Tssr99025 10 95323550 to 95323610 60 - TSS region transcription start site region 99025
Tssr99026 10 95323993 to 95324008 15 - TSS region transcription start site region 99026
Tssr99027 10 95324072 to 95324114 42 - TSS region transcription start site region 99027
Tssr99028 10 95324126 to 95324144 18 - TSS region transcription start site region 99028
Tssr99029 10 95324146 to 95324157 11 - TSS region transcription start site region 99029
2310039L15Rik 10 95336276 to 95363216 26940 + lincRNA gene RIKEN cDNA 2310039L15 gene
Cpgi2137 10 95352684 to 95352910 226 CpG island CpG island 2137
Socs2 10 95385362 to 95417180 31818 - protein coding gene suppressor of cytokine signaling 2