Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:94467796-94838052

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tmcc3 10 94311949 to 94590956 279007 + protein coding gene transmembrane and coiled coil domains 3
Tssr95321 10 94467908 to 94467933 25 + TSS region transcription start site region 95321
Tssr95322 10 94476610 to 94476621 11 + TSS region transcription start site region 95322
Tssr98993 10 94479579 to 94479597 18 - TSS region transcription start site region 98993
Tssr95323 10 94493212 to 94493223 11 + TSS region transcription start site region 95323
Tssr95324 10 94498916 to 94498924 8 + TSS region transcription start site region 95324
Tssr95325 10 94499069 to 94499077 8 + TSS region transcription start site region 95325
Tssr95326 10 94499317 to 94499328 11 + TSS region transcription start site region 95326
Gm40743 10 94512851 to 94514779 1928 - lncRNA gene predicted gene, 40743
Cpgi2128 10 94514406 to 94515672 1266 CpG island CpG island 2128
Tssr95327 10 94514825 to 94514922 97 + TSS region transcription start site region 95327
Tssr95328 10 94514950 to 94514964 14 + TSS region transcription start site region 95328
Tssr95329 10 94515006 to 94515017 11 + TSS region transcription start site region 95329
D10Mit177 10 94528025 to 94528166 141 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 177
Tssr95330 10 94550819 to 94550833 14 + TSS region transcription start site region 95330
Tssr95331 10 94550865 to 94550876 11 + TSS region transcription start site region 95331
Tssr95332 10 94550914 to 94550934 20 + TSS region transcription start site region 95332
Tssr95333 10 94550945 to 94550962 17 + TSS region transcription start site region 95333
Tssr95334 10 94550965 to 94550976 11 + TSS region transcription start site region 95334
D10Mit309 10 94551781 to 94551914 133 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology-309
Tmcc3os 10 94567828 to 94612084 44256 - antisense lncRNA gene transmembrane and coiled coil domains 3, opposite strand
Tssr95335 10 94568128 to 94568144 16 + TSS region transcription start site region 95335
Tssr95336 10 94575108 to 94575119 11 + TSS region transcription start site region 95336
Tssr95337 10 94575272 to 94575295 23 + TSS region transcription start site region 95337
Tssr95338 10 94575305 to 94575325 20 + TSS region transcription start site region 95338
Tssr95339 10 94575339 to 94575352 13 + TSS region transcription start site region 95339
Tssr95340 10 94576217 to 94576220 3 + TSS region transcription start site region 95340
Tssr95341 10 94576254 to 94576270 16 + TSS region transcription start site region 95341
Mir7211 10 94586137 to 94586199 62 - miRNA gene microRNA 7211
Gm32898 10 94600050 to 94623704 23654 - lncRNA gene predicted gene, 32898
Gm48657 10 94620540 to 94648657 28117 + lincRNA gene predicted gene, 48657
Gm48658 10 94652796 to 94653052 256 - pseudogene predicted gene, 48658
Cep83os 10 94673493 to 94688613 15120 - bidirectional promoter lncRNA gene centrosomal protein 83, opposite strand
Gm49167 10 94685705 to 94688619 2914 + unclassified gene predicted gene, 49167
Cpgi2129 10 94688146 to 94689338 1192 CpG island CpG island 2129
Cep83 10 94688498 to 94790336 101838 + protein coding gene centrosomal protein 83
Tssr98994 10 94688555 to 94688612 57 - TSS region transcription start site region 98994
Tssr95342 10 94688619 to 94688641 22 + TSS region transcription start site region 95342
Tssr95343 10 94688647 to 94688682 35 + TSS region transcription start site region 95343
Tssr95344 10 94688739 to 94688808 69 + TSS region transcription start site region 95344
Tssr98995 10 94711144 to 94711145 1 - TSS region transcription start site region 98995
Tssr95345 10 94719693 to 94719717 24 + TSS region transcription start site region 95345
Tssr95346 10 94725645 to 94725657 12 + TSS region transcription start site region 95346
Tssr95347 10 94750340 to 94750374 34 + TSS region transcription start site region 95347
Gm48689 10 94781974 to 94787161 5187 - antisense lncRNA gene predicted gene, 48689
Plxnc1 10 94790866 to 94944835 153969 - protein coding gene plexin C1
Tssr98996 10 94792045 to 94792049 4 - TSS region transcription start site region 98996
B405C9T 10 94819229 to 94819470 241 DNA segment DNA segment, B405C9T
Gm24186 10 94821529 to 94821655 126 - rRNA gene predicted gene, 24186
Tssr98997 10 94829455 to 94829483 28 - TSS region transcription start site region 98997
Tssr98998 10 94829511 to 94829532 21 - TSS region transcription start site region 98998