Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:94133745-94543755

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fgd6 10 94036001 to 94145339 109338 + protein coding gene FYVE, RhoGEF and PH domain containing 6
Tssr95303 10 94141298 to 94141328 30 + TSS region transcription start site region 95303
Tssr95304 10 94142838 to 94142849 11 + TSS region transcription start site region 95304
Cpgi2122 10 94147601 to 94148494 893 CpG island CpG island 2122
Tssr95305 10 94147907 to 94147966 59 + TSS region transcription start site region 95305
Tssr95306 10 94147982 to 94148009 27 + TSS region transcription start site region 95306
Nr2c1 10 94148023 to 94197211 49188 + protein coding gene nuclear receptor subfamily 2, group C, member 1
Tssr95307 10 94162278 to 94162297 19 + TSS region transcription start site region 95307
Cpgi2123 10 94165498 to 94165688 190 CpG island CpG island 2123
Gm26122 10 94184492 to 94184573 81 - snRNA gene predicted gene, 26122
Cpgi2124 10 94198831 to 94199552 721 CpG island CpG island 2124
Ndufa12 10 94199009 to 94220948 21939 + protein coding gene NADH:ubiquinone oxidoreductase subunit A12
Tssr95308 10 94199027 to 94199043 16 + TSS region transcription start site region 95308
Gm32749 10 94230565 to 94238611 8046 - lncRNA gene predicted gene, 32749
Cpgi2125 10 94230648 to 94230832 184 CpG island CpG island 2125
Gm4792 10 94293665 to 94298703 5038 - protein coding gene predicted gene 4792
Tssr98989 10 94298585 to 94298613 28 - TSS region transcription start site region 98989
Tssr98990 10 94298650 to 94298659 9 - TSS region transcription start site region 98990
Cpgi2126 10 94311637 to 94312486 849 CpG island CpG island 2126
Tssr95309 10 94311896 to 94311942 46 + TSS region transcription start site region 95309
Tssr95310 10 94311944 to 94311978 34 + TSS region transcription start site region 95310
Tmcc3 10 94311949 to 94590956 279007 + protein coding gene transmembrane and coiled coil domains 3
Tssr95311 10 94312149 to 94312162 13 + TSS region transcription start site region 95311
Tssr98991 10 94312582 to 94312593 11 - TSS region transcription start site region 98991
Tssr95312 10 94338745 to 94338755 10 + TSS region transcription start site region 95312
Tssr95313 10 94354526 to 94354530 4 + TSS region transcription start site region 95313
Tssr95314 10 94356793 to 94356804 11 + TSS region transcription start site region 95314
Tssr95315 10 94356976 to 94357038 62 + TSS region transcription start site region 95315
Tssr95316 10 94357041 to 94357057 16 + TSS region transcription start site region 95316
Tssr95317 10 94357059 to 94357077 18 + TSS region transcription start site region 95317
Tssr95318 10 94406188 to 94406225 37 + TSS region transcription start site region 95318
Gm16155 10 94408891 to 94410732 1841 + sense intronic lncRNA gene predicted gene 16155
Gm32827 10 94417965 to 94428628 10663 - lncRNA gene predicted gene, 32827
Cpgi2127 10 94427011 to 94427165 154 CpG island CpG island 2127
Tssr98992 10 94433072 to 94433074 2 - TSS region transcription start site region 98992
Tssr95319 10 94435474 to 94435517 43 + TSS region transcription start site region 95319
Tssr95320 10 94463836 to 94463841 5 + TSS region transcription start site region 95320
Tssr95321 10 94467908 to 94467933 25 + TSS region transcription start site region 95321
Tssr95322 10 94476610 to 94476621 11 + TSS region transcription start site region 95322
Tssr98993 10 94479579 to 94479597 18 - TSS region transcription start site region 98993
Tssr95323 10 94493212 to 94493223 11 + TSS region transcription start site region 95323
Tssr95324 10 94498916 to 94498924 8 + TSS region transcription start site region 95324
Tssr95325 10 94499069 to 94499077 8 + TSS region transcription start site region 95325
Tssr95326 10 94499317 to 94499328 11 + TSS region transcription start site region 95326
Gm40743 10 94512851 to 94514779 1928 - lncRNA gene predicted gene, 40743
Cpgi2128 10 94514406 to 94515672 1266 CpG island CpG island 2128
Tssr95327 10 94514825 to 94514922 97 + TSS region transcription start site region 95327
Tssr95328 10 94514950 to 94514964 14 + TSS region transcription start site region 95328
Tssr95329 10 94515006 to 94515017 11 + TSS region transcription start site region 95329
D10Mit177 10 94528025 to 94528166 141 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 177