Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:93976298-94306328

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vezt 10 93961522 to 94035799 74277 - protein coding gene vezatin, adherens junctions transmembrane protein
Gm48191 10 94028081 to 94028365 284 + pseudogene predicted gene, 48191
Gm49628 10 94034012 to 94035801 1789 - unclassified gene predicted gene, 49628
Cpgi2121 10 94035306 to 94036788 1482 CpG island CpG island 2121
Tssr95293 10 94035449 to 94035471 22 + TSS region transcription start site region 95293
Tssr98985 10 94035728 to 94035769 41 - TSS region transcription start site region 98985
Tssr98986 10 94035771 to 94035787 16 - TSS region transcription start site region 98986
Tssr98987 10 94035789 to 94035816 27 - TSS region transcription start site region 98987
Fgd6 10 94036001 to 94145339 109338 + protein coding gene FYVE, RhoGEF and PH domain containing 6
Tssr95294 10 94036044 to 94036055 11 + TSS region transcription start site region 95294
Tssr95295 10 94036057 to 94036121 64 + TSS region transcription start site region 95295
Tssr3327 10 94036364 to 94036375 11 + TSS region transcription start site region 3327
Tssr98988 10 94036723 to 94036749 26 - TSS region transcription start site region 98988
Tssr95296 10 94036946 to 94036981 35 + TSS region transcription start site region 95296
Tssr95297 10 94057361 to 94057366 5 + TSS region transcription start site region 95297
Tssr95298 10 94073396 to 94073415 19 + TSS region transcription start site region 95298
Tssr95299 10 94074039 to 94074044 5 + TSS region transcription start site region 95299
Tssr95300 10 94083861 to 94083862 1 + TSS region transcription start site region 95300
Gm18391 10 94097483 to 94098140 657 - pseudogene predicted gene, 18391
D10Mit41 10 94102654 to 94102897 243 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 41
Gm48372 10 94108739 to 94111153 2414 + unclassified gene predicted gene, 48372
Tssr95301 10 94114714 to 94114728 14 + TSS region transcription start site region 95301
Tssr95302 10 94133348 to 94133360 12 + TSS region transcription start site region 95302
Tssr95303 10 94141298 to 94141328 30 + TSS region transcription start site region 95303
Tssr95304 10 94142838 to 94142849 11 + TSS region transcription start site region 95304
Cpgi2122 10 94147601 to 94148494 893 CpG island CpG island 2122
Tssr95305 10 94147907 to 94147966 59 + TSS region transcription start site region 95305
Tssr95306 10 94147982 to 94148009 27 + TSS region transcription start site region 95306
Nr2c1 10 94148023 to 94197211 49188 + protein coding gene nuclear receptor subfamily 2, group C, member 1
Tssr95307 10 94162278 to 94162297 19 + TSS region transcription start site region 95307
Cpgi2123 10 94165498 to 94165688 190 CpG island CpG island 2123
Gm26122 10 94184492 to 94184573 81 - snRNA gene predicted gene, 26122
Cpgi2124 10 94198831 to 94199552 721 CpG island CpG island 2124
Ndufa12 10 94199009 to 94220948 21939 + protein coding gene NADH:ubiquinone oxidoreductase subunit A12
Tssr95308 10 94199027 to 94199043 16 + TSS region transcription start site region 95308
Gm32749 10 94230565 to 94238611 8046 - lncRNA gene predicted gene, 32749
Cpgi2125 10 94230648 to 94230832 184 CpG island CpG island 2125
Gm4792 10 94293665 to 94298703 5038 - protein coding gene predicted gene 4792
Tssr98989 10 94298585 to 94298613 28 - TSS region transcription start site region 98989
Tssr98990 10 94298650 to 94298659 9 - TSS region transcription start site region 98990