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Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:93353054-93554039

33 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr98968	10	93380116 to 93380134	18	-	TSS region	transcription start site region 98968
Gm47344	10	93397090 to 93397273	183	-	pseudogene	predicted gene, 47344
Gm40742	10	93430285 to 93431959	1674	-	lncRNA gene	predicted gene, 40742
Cpgi2109	10	93430855 to 93431188	333		CpG island	CpG island 2109
Mir7688	10	93433107 to 93433162	55	+	miRNA gene	microRNA 7688
Tssr3324	10	93437122 to 93437138	16	+	TSS region	transcription start site region 3324
n-TDgtc8	10	93452978 to 93453049	71	-	tRNA gene	nuclear encoded tRNA aspartic acid 8 (anticodon GTC)
Cpgi2110	10	93453054 to 93454039	985		CpG island	CpG island 2110
Tssr95259	10	93453382 to 93453397	15	+	TSS region	transcription start site region 95259
Tssr95260	10	93453402 to 93453470	68	+	TSS region	transcription start site region 95260
Lta4h	10	93453411 to 93484875	31464	+	protein coding gene	leukotriene A4 hydrolase
Tssr95261	10	93453472 to 93453483	11	+	TSS region	transcription start site region 95261
Tssr95262	10	93468136 to 93468158	22	+	TSS region	transcription start site region 95262
Tssr95263	10	93488766 to 93488774	8	+	TSS region	transcription start site region 95263
Hal	10	93488768 to 93516761	27993	+	protein coding gene	histidine ammonia lyase
Tssr95264	10	93489059 to 93489076	17	+	TSS region	transcription start site region 95264
Tssr95265	10	93501656 to 93501683	27	+	TSS region	transcription start site region 95265
Tssr95266	10	93504333 to 93504342	9	+	TSS region	transcription start site region 95266
Tssr98969	10	93516576 to 93516582	6	-	TSS region	transcription start site region 98969
Tssr95267	10	93516925 to 93516945	20	+	TSS region	transcription start site region 95267
Tssr95268	10	93516966 to 93516971	5	+	TSS region	transcription start site region 95268
Tssr3325	10	93519056 to 93519058	2	-	TSS region	transcription start site region 3325
Amdhd1	10	93523338 to 93540033	16695	-	protein coding gene	amidohydrolase domain containing 1
Cpgi2111	10	93534334 to 93534688	354		CpG island	CpG island 2111
Cpgi2112	10	93539731 to 93540146	415		CpG island	CpG island 2112
Tssr98970	10	93539935 to 93539948	13	-	TSS region	transcription start site region 98970
Tssr98971	10	93539971 to 93540014	43	-	TSS region	transcription start site region 98971
Tssr98972	10	93540016 to 93540027	11	-	TSS region	transcription start site region 98972
Cpgi2113	10	93540416 to 93540758	342		CpG island	CpG island 2113
Tssr95269	10	93540605 to 93540614	9	+	TSS region	transcription start site region 95269
Tssr95270	10	93540626 to 93540653	27	+	TSS region	transcription start site region 95270
Ccdc38	10	93540632 to 93584327	43695	+	protein coding gene	coiled-coil domain containing 38
Tssr95271	10	93551829 to 93551830	1	+	TSS region	transcription start site region 95271