Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:89645809-89845823

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Scyl2 10 89638721 to 89686285 47564 - protein coding gene SCY1-like 2 (S. cerevisiae)
Tssr98886 10 89647023 to 89647035 12 - TSS region transcription start site region 98886
Tssr98887 10 89674190 to 89674195 5 - TSS region transcription start site region 98887
Cpgi2091 10 89685606 to 89686491 885 CpG island CpG island 2091
Tssr98888 10 89686197 to 89686214 17 - TSS region transcription start site region 98888
Tssr98889 10 89686219 to 89686244 25 - TSS region transcription start site region 98889
Tssr98890 10 89686250 to 89686306 56 - TSS region transcription start site region 98890
Tssr95178 10 89686365 to 89686421 56 + TSS region transcription start site region 95178
1500026H17Rik 10 89686371 to 89700866 14495 + bidirectional promoter lncRNA gene RIKEN cDNA 1500026H17 gene
Actr6 10 89711971 to 89732295 20324 - protein coding gene ARP6 actin-related protein 6
Cpgi2092 10 89731922 to 89732693 771 CpG island CpG island 2092
Tssr98891 10 89732253 to 89732324 71 - TSS region transcription start site region 98891
Gm30963 10 89736777 to 89741413 4636 - lncRNA gene predicted gene, 30963
Tssr98892 10 89741214 to 89741236 22 - TSS region transcription start site region 98892
E330037I15Rik 10 89743616 to 89745818 2202 unclassified gene RIKEN cDNA E330037I15 gene
Cpgi2093 10 89744811 to 89745868 1057 CpG island CpG island 2093
Tssr95179 10 89744988 to 89745022 34 + TSS region transcription start site region 95179
Uhrf1bp1l 10 89744991 to 89819871 74880 + protein coding gene UHRF1 (ICBP90) binding protein 1-like
Tssr98893 10 89745772 to 89745778 6 - TSS region transcription start site region 98893
Tssr98894 10 89745795 to 89745807 12 - TSS region transcription start site region 98894
Tssr98895 10 89745809 to 89745823 14 - TSS region transcription start site region 98895
Tssr95180 10 89750981 to 89750985 4 + TSS region transcription start site region 95180
Tssr95181 10 89781169 to 89781185 16 + TSS region transcription start site region 95181
Tssr95182 10 89785837 to 89785841 4 + TSS region transcription start site region 95182
Gm31090 10 89812159 to 89813893 1734 + lncRNA gene predicted gene, 31090
Gm26180 10 89821340 to 89821446 106 - snRNA gene predicted gene, 26180
Gm46238 10 89822878 to 89826535 3657 + protein coding gene predicted gene, 46238