Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 10:89641214-89841236

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27 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Scyl2 10 89638721 to 89686285 47564 - protein coding gene SCY1-like 2 (S. cerevisiae)
Tssr98886 10 89647023 to 89647035 12 - TSS region transcription start site region 98886
Tssr98887 10 89674190 to 89674195 5 - TSS region transcription start site region 98887
Cpgi2091 10 89685606 to 89686491 885 CpG island CpG island 2091
Tssr98888 10 89686197 to 89686214 17 - TSS region transcription start site region 98888
Tssr98889 10 89686219 to 89686244 25 - TSS region transcription start site region 98889
Tssr98890 10 89686250 to 89686306 56 - TSS region transcription start site region 98890
Tssr95178 10 89686365 to 89686421 56 + TSS region transcription start site region 95178
1500026H17Rik 10 89686371 to 89700866 14495 + lncRNA gene RIKEN cDNA 1500026H17 gene
Actr6 10 89711971 to 89732295 20324 - protein coding gene ARP6 actin-related protein 6
Cpgi2092 10 89731922 to 89732693 771 CpG island CpG island 2092
Tssr98891 10 89732253 to 89732324 71 - TSS region transcription start site region 98891
Gm30963 10 89736771 to 89741193 4422 - lncRNA gene predicted gene, 30963
Tssr98892 10 89741214 to 89741236 22 - TSS region transcription start site region 98892
E330037I15Rik 10 89743617 to 89745819 2202 - lncRNA gene RIKEN cDNA E330037I15 gene
Cpgi2093 10 89744811 to 89745868 1057 CpG island CpG island 2093
Tssr95179 10 89744988 to 89745022 34 + TSS region transcription start site region 95179
Uhrf1bp1l 10 89744991 to 89819871 74880 + protein coding gene UHRF1 (ICBP90) binding protein 1-like
Tssr98893 10 89745772 to 89745778 6 - TSS region transcription start site region 98893
Tssr98894 10 89745795 to 89745807 12 - TSS region transcription start site region 98894
Tssr98895 10 89745809 to 89745823 14 - TSS region transcription start site region 98895
Tssr95180 10 89750981 to 89750985 4 + TSS region transcription start site region 95180
Tssr95181 10 89781169 to 89781185 16 + TSS region transcription start site region 95181
Tssr95182 10 89785837 to 89785841 4 + TSS region transcription start site region 95182
Gm31090 10 89812159 to 89813893 1734 + lncRNA gene predicted gene, 31090
Gm26180 10 89821340 to 89821446 106 - snRNA gene predicted gene, 26180
Gm46238 10 89822878 to 89826535 3657 + protein coding gene predicted gene, 46238