Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:89134888-89734894

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ano4 10 88948994 to 89344762 395768 - protein coding gene anoctamin 4
Gm30769 10 89257132 to 89259142 2010 + lncRNA gene predicted gene, 30769
Tssr98859 10 89257515 to 89257527 12 - TSS region transcription start site region 98859
Tssr98860 10 89257578 to 89257599 21 - TSS region transcription start site region 98860
Tssr98861 10 89257645 to 89257657 12 - TSS region transcription start site region 98861
Tssr98862 10 89257675 to 89257694 19 - TSS region transcription start site region 98862
Tssr98863 10 89257696 to 89257712 16 - TSS region transcription start site region 98863
Tssr98864 10 89257806 to 89257831 25 - TSS region transcription start site region 98864
Cpgi2089 10 89344397 to 89345329 932 CpG island CpG island 2089
Tssr98865 10 89345075 to 89345096 21 - TSS region transcription start site region 98865
Gas2l3 10 89408823 to 89443967 35144 - protein coding gene growth arrest-specific 2 like 3
Tssr98866 10 89410838 to 89410851 13 - TSS region transcription start site region 98866
Tssr98867 10 89417709 to 89417713 4 - TSS region transcription start site region 98867
Tssr98868 10 89434054 to 89434091 37 - TSS region transcription start site region 98868
Tssr98869 10 89434648 to 89434659 11 - TSS region transcription start site region 98869
Tssr98870 10 89434665 to 89434705 40 - TSS region transcription start site region 98870
Tssr98871 10 89434888 to 89434894 6 - TSS region transcription start site region 98871
Cpgi2090 10 89443351 to 89444232 881 CpG island CpG island 2090
Tssr95174 10 89443436 to 89443445 9 + TSS region transcription start site region 95174
Tssr95175 10 89443495 to 89443520 25 + TSS region transcription start site region 95175
Tssr98872 10 89443888 to 89443962 74 - TSS region transcription start site region 98872
Tssr95176 10 89444048 to 89444072 24 + TSS region transcription start site region 95176
Nr1h4 10 89454234 to 89533585 79351 - protein coding gene nuclear receptor subfamily 1, group H, member 4
Tssr95177 10 89465403 to 89465407 4 + TSS region transcription start site region 95177
Tssr98873 10 89481011 to 89481016 5 - TSS region transcription start site region 98873
Tssr98874 10 89506631 to 89506650 19 - TSS region transcription start site region 98874
Tssr98875 10 89533529 to 89533541 12 - TSS region transcription start site region 98875
Tssr98876 10 89533550 to 89533590 40 - TSS region transcription start site region 98876
Tssr98877 10 89533591 to 89533635 44 - TSS region transcription start site region 98877
Tssr98878 10 89548228 to 89548251 23 - TSS region transcription start site region 98878
Gm48087 10 89555083 to 89555719 636 - pseudogene predicted gene, 48087
Slc17a8 10 89574020 to 89621249 47229 - protein coding gene solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8
Tssr98879 10 89592926 to 89592952 26 - TSS region transcription start site region 98879
Tssr98880 10 89600692 to 89600719 27 - TSS region transcription start site region 98880
Tssr98881 10 89621219 to 89621237 18 - TSS region transcription start site region 98881
Tssr98882 10 89621263 to 89621275 12 - TSS region transcription start site region 98882
Tssr98883 10 89621279 to 89621290 11 - TSS region transcription start site region 98883
Tssr98884 10 89621429 to 89621464 35 - TSS region transcription start site region 98884
Tssr98885 10 89632008 to 89632019 11 - TSS region transcription start site region 98885
Scyl2 10 89638721 to 89686285 47564 - protein coding gene SCY1-like 2 (S. cerevisiae)
Tssr98886 10 89647023 to 89647035 12 - TSS region transcription start site region 98886
Tssr98887 10 89674190 to 89674195 5 - TSS region transcription start site region 98887
Cpgi2091 10 89685606 to 89686491 885 CpG island CpG island 2091
Tssr98888 10 89686197 to 89686214 17 - TSS region transcription start site region 98888
Tssr98889 10 89686219 to 89686244 25 - TSS region transcription start site region 98889
Tssr98890 10 89686250 to 89686306 56 - TSS region transcription start site region 98890
Tssr95178 10 89686365 to 89686421 56 + TSS region transcription start site region 95178
1500026H17Rik 10 89686371 to 89700866 14495 + bidirectional promoter lncRNA gene RIKEN cDNA 1500026H17 gene
Actr6 10 89711971 to 89732295 20324 - protein coding gene ARP6 actin-related protein 6
Cpgi2092 10 89731922 to 89732693 771 CpG island CpG island 2092
Tssr98891 10 89732253 to 89732324 71 - TSS region transcription start site region 98891