Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:88374656-88544670

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm40733 10 88368052 to 88379133 11081 - lncRNA gene predicted gene, 40733
Cpgi2081 10 88378926 to 88379938 1012 CpG island CpG island 2081
Tssr98836 10 88379051 to 88379073 22 - TSS region transcription start site region 98836
Tssr95153 10 88379127 to 88379169 42 + TSS region transcription start site region 95153
Tssr95154 10 88379217 to 88379299 82 + TSS region transcription start site region 95154
Gnptab 10 88379232 to 88447330 68098 + protein coding gene N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits
Gm26546 10 88379244 to 88383711 4467 - lincRNA gene predicted gene, 26546
Tssr98837 10 88380156 to 88380180 24 - TSS region transcription start site region 98837
Tssr95155 10 88414063 to 88414069 6 + TSS region transcription start site region 95155
B430006N09Rik 10 88415501 to 88415888 387 unclassified non-coding RNA gene RIKEN cDNA B430006N09 gene
Tssr95156 10 88433998 to 88434009 11 + TSS region transcription start site region 95156
Tssr95157 10 88437480 to 88437492 12 + TSS region transcription start site region 95157
Gm16235 10 88444236 to 88449887 5651 - antisense lncRNA gene predicted gene 16235
Cpgi2082 10 88459340 to 88460088 748 CpG island CpG island 2082
Sycp3 10 88459587 to 88473236 13649 + protein coding gene synaptonemal complex protein 3
Tssr3309 10 88459591 to 88459615 24 + TSS region transcription start site region 3309
Tssr3310 10 88459620 to 88459639 19 + TSS region transcription start site region 3310
Tssr95158 10 88459656 to 88459670 14 + TSS region transcription start site region 95158
Chpt1 10 88469513 to 88503970 34457 - protein coding gene choline phosphotransferase 1
Tssr98838 10 88471150 to 88471185 35 - TSS region transcription start site region 98838
Tssr98839 10 88479487 to 88479491 4 - TSS region transcription start site region 98839
Cpgi2083 10 88503267 to 88504376 1109 CpG island CpG island 2083
Tssr98840 10 88503859 to 88503899 40 - TSS region transcription start site region 98840
Tssr98841 10 88503912 to 88503923 11 - TSS region transcription start site region 98841
Tssr98842 10 88503928 to 88503950 22 - TSS region transcription start site region 98842
Tssr98843 10 88503952 to 88503973 21 - TSS region transcription start site region 98843
Tssr98844 10 88504159 to 88504167 8 - TSS region transcription start site region 98844
Mybpc1 10 88518279 to 88605152 86873 - protein coding gene myosin binding protein C, slow-type
Tssr98845 10 88537288 to 88537290 2 - TSS region transcription start site region 98845