Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:8833216-9173360

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sash1 10 8722219 to 8886070 163851 - protein coding gene SAM and SH3 domain containing 1
Tssr96651 10 8839771 to 8839782 11 - TSS region transcription start site region 96651
Tssr96652 10 8852187 to 8852190 3 - TSS region transcription start site region 96652
4930553I21Rik 10 8860864 to 8861443 579 - unclassified gene RIKEN cDNA 4930553I21 gene
Tssr96653 10 8861442 to 8861446 4 - TSS region transcription start site region 96653
Tssr92334 10 8866595 to 8866603 8 + TSS region transcription start site region 92334
Tssr92335 10 8874219 to 8874240 21 + TSS region transcription start site region 92335
Tssr92336 10 8884062 to 8884098 36 + TSS region transcription start site region 92336
Gm26674 10 8884637 to 8886878 2241 + antisense lncRNA gene predicted gene, 26674
Cpgi1286 10 8885629 to 8886766 1137 CpG island CpG island 1286
Tssr96654 10 8885661 to 8885698 37 - TSS region transcription start site region 96654
Tssr96655 10 8885868 to 8885885 17 - TSS region transcription start site region 96655
Tssr96656 10 8885895 to 8885947 52 - TSS region transcription start site region 96656
Tssr96657 10 8886015 to 8886030 15 - TSS region transcription start site region 96657
Tssr96658 10 8886033 to 8886076 43 - TSS region transcription start site region 96658
Tssr96659 10 8886092 to 8886101 9 - TSS region transcription start site region 96659
Tssr96660 10 8886116 to 8886125 9 - TSS region transcription start site region 96660
Tssr96661 10 8886201 to 8886216 15 - TSS region transcription start site region 96661
Tssr96662 10 8886231 to 8886245 14 - TSS region transcription start site region 96662
Tssr96663 10 8886525 to 8886543 18 - TSS region transcription start site region 96663
Tssr96664 10 8886589 to 8886612 23 - TSS region transcription start site region 96664
Tssr92337 10 8903965 to 8903975 10 + TSS region transcription start site region 92337
Gm48727 10 8903981 to 8945137 41156 + lincRNA gene predicted gene, 48727
Tssr96665 10 8945235 to 8945269 34 - TSS region transcription start site region 96665
Tssr96666 10 8945281 to 8945294 13 - TSS region transcription start site region 96666
Gm48728 10 8951949 to 8967244 15295 + lincRNA gene predicted gene, 48728
D10Jpk2 10 9003216 to 9003360 144 DNA segment DNA segment, Chr 10, Japan, Kominami 2
Tssr96667 10 9027225 to 9027255 30 - TSS region transcription start site region 96667
Tssr96668 10 9027295 to 9027335 40 - TSS region transcription start site region 96668
D10Mit279 10 9048469 to 9048745 276 DNA segment DNA Segment, Chr 10 Massachusetts Institute of Technology 279
Gm48743 10 9069419 to 9071475 2056 - unclassified gene predicted gene, 48743
Tssr96669 10 9071150 to 9071154 4 - TSS region transcription start site region 96669