Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:87818436-91068445

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393 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ssrq4 10 82655104 to 91020240 8365136 QTL stress response QTL 4
Igf1os 10 87826377 to 87863381 37004 - antisense lncRNA gene insulin-like growth factor 1, opposite strand
n-TKctt21 10 87829886 to 87829958 72 - tRNA gene nuclear encoded tRNA lysine 21 (anticodon TTT)
Tssr98813 10 87830764 to 87830789 25 - TSS region transcription start site region 98813
Tssr95033 10 87830943 to 87830955 12 + TSS region transcription start site region 95033
Tssr95034 10 87853577 to 87853592 15 + TSS region transcription start site region 95034
Tssr95035 10 87858255 to 87858294 39 + TSS region transcription start site region 95035
Igf1 10 87858265 to 87937042 78777 + protein coding gene insulin-like growth factor 1
Tssr95036 10 87858602 to 87858620 18 + TSS region transcription start site region 95036
Tssr95037 10 87858639 to 87858649 10 + TSS region transcription start site region 95037
Tssr95038 10 87858656 to 87858665 9 + TSS region transcription start site region 95038
Tssr95039 10 87858681 to 87858695 14 + TSS region transcription start site region 95039
Tssr95040 10 87858816 to 87858832 16 + TSS region transcription start site region 95040
Tssr95041 10 87859046 to 87859057 11 + TSS region transcription start site region 95041
Tssr95042 10 87859062 to 87859094 32 + TSS region transcription start site region 95042
Tssr95043 10 87859107 to 87859126 19 + TSS region transcription start site region 95043
Tssr95044 10 87859158 to 87859178 20 + TSS region transcription start site region 95044
Tssr95045 10 87859180 to 87859195 15 + TSS region transcription start site region 95045
Tssr95046 10 87859199 to 87859216 17 + TSS region transcription start site region 95046
Tssr95047 10 87859233 to 87859244 11 + TSS region transcription start site region 95047
Tssr95048 10 87859255 to 87859266 11 + TSS region transcription start site region 95048
Tssr95049 10 87859279 to 87859288 9 + TSS region transcription start site region 95049
Tssr95050 10 87859291 to 87859302 11 + TSS region transcription start site region 95050
Tssr95051 10 87859310 to 87859334 24 + TSS region transcription start site region 95051
Tssr95052 10 87859335 to 87859336 1 + TSS region transcription start site region 95052
Tssr95053 10 87859356 to 87859367 11 + TSS region transcription start site region 95053
Tssr95054 10 87859372 to 87859387 15 + TSS region transcription start site region 95054
Tssr95055 10 87859481 to 87859492 11 + TSS region transcription start site region 95055
Tssr95056 10 87859535 to 87859572 37 + TSS region transcription start site region 95056
Tssr95057 10 87859593 to 87859612 19 + TSS region transcription start site region 95057
Tssr95058 10 87859636 to 87859647 11 + TSS region transcription start site region 95058
Tssr95059 10 87859698 to 87859707 9 + TSS region transcription start site region 95059
Tssr95060 10 87860062 to 87860086 24 + TSS region transcription start site region 95060
Tssr95061 10 87860144 to 87860159 15 + TSS region transcription start site region 95061
Tssr95062 10 87860166 to 87860179 13 + TSS region transcription start site region 95062
Cpgi2076 10 87860173 to 87860357 184 CpG island CpG island 2076
Tssr98814 10 87860200 to 87860202 2 - TSS region transcription start site region 98814
Tssr95063 10 87860221 to 87860240 19 + TSS region transcription start site region 95063
Tssr95064 10 87860249 to 87860267 18 + TSS region transcription start site region 95064
Tssr98815 10 87860355 to 87860365 10 - TSS region transcription start site region 98815
Tssr95065 10 87860437 to 87860464 27 + TSS region transcription start site region 95065
Tssr95066 10 87860477 to 87860492 15 + TSS region transcription start site region 95066
Tssr95067 10 87860824 to 87860830 6 + TSS region transcription start site region 95067
Tssr95068 10 87861006 to 87861031 25 + TSS region transcription start site region 95068
Tssr95069 10 87861077 to 87861109 32 + TSS region transcription start site region 95069
Tssr95070 10 87861295 to 87861306 11 + TSS region transcription start site region 95070
Tssr95071 10 87861309 to 87861338 29 + TSS region transcription start site region 95071
Tssr95072 10 87863784 to 87863798 14 + TSS region transcription start site region 95072
Tssr95073 10 87864028 to 87864069 41 + TSS region transcription start site region 95073
Tssr95074 10 87864329 to 87864369 40 + TSS region transcription start site region 95074
Tssr95075 10 87864722 to 87864861 139 + TSS region transcription start site region 95075
Tssr95076 10 87864871 to 87864902 31 + TSS region transcription start site region 95076
Tssr95077 10 87865020 to 87865037 17 + TSS region transcription start site region 95077
Tssr95078 10 87871936 to 87871949 13 + TSS region transcription start site region 95078
Tssr95079 10 87880814 to 87880825 11 + TSS region transcription start site region 95079
Tssr95080 10 87880943 to 87880956 13 + TSS region transcription start site region 95080
Tssr95081 10 87892414 to 87892416 2 + TSS region transcription start site region 95081
Tssr95082 10 87892465 to 87892487 22 + TSS region transcription start site region 95082
Tssr95083 10 87892494 to 87892513 19 + TSS region transcription start site region 95083
Tssr95084 10 87892585 to 87892614 29 + TSS region transcription start site region 95084
Tssr95085 10 87903966 to 87903991 25 + TSS region transcription start site region 95085
Tssr95086 10 87906921 to 87906935 14 + TSS region transcription start site region 95086
Tssr95087 10 87907965 to 87907977 12 + TSS region transcription start site region 95087
Tssr95088 10 87913605 to 87913622 17 + TSS region transcription start site region 95088
Tssr95089 10 87913626 to 87913639 13 + TSS region transcription start site region 95089
Tssr95090 10 87913648 to 87913662 14 + TSS region transcription start site region 95090
Tssr95091 10 87913664 to 87913684 20 + TSS region transcription start site region 95091
Tssr95092 10 87913691 to 87913702 11 + TSS region transcription start site region 95092
Tssr95093 10 87913704 to 87913736 32 + TSS region transcription start site region 95093
Tssr95094 10 87913747 to 87913761 14 + TSS region transcription start site region 95094
Tssr95095 10 87913766 to 87913769 3 + TSS region transcription start site region 95095
Tssr95096 10 87914376 to 87914387 11 + TSS region transcription start site region 95096
Tssr95097 10 87914392 to 87914413 21 + TSS region transcription start site region 95097
Tssr95098 10 87914524 to 87914539 15 + TSS region transcription start site region 95098
Tssr95099 10 87915287 to 87915313 26 + TSS region transcription start site region 95099
Tssr98816 10 87915321 to 87915354 33 - TSS region transcription start site region 98816
Tssr95100 10 87916301 to 87916308 7 + TSS region transcription start site region 95100
Tssr95101 10 87916358 to 87916376 18 + TSS region transcription start site region 95101
Tssr95102 10 87916392 to 87916419 27 + TSS region transcription start site region 95102
Tssr95103 10 87916427 to 87916438 11 + TSS region transcription start site region 95103
Tssr95104 10 87916476 to 87916507 31 + TSS region transcription start site region 95104
Tssr95105 10 87921595 to 87921599 4 + TSS region transcription start site region 95105
Tssr95106 10 87923227 to 87923267 40 + TSS region transcription start site region 95106
Tssr95107 10 87925262 to 87925266 4 + TSS region transcription start site region 95107
Tssr95108 10 87926396 to 87926405 9 + TSS region transcription start site region 95108
Tssr95109 10 87929095 to 87929145 50 + TSS region transcription start site region 95109
Tssr95110 10 87929242 to 87929256 14 + TSS region transcription start site region 95110
Tssr95111 10 87930687 to 87930697 10 + TSS region transcription start site region 95111
Tssr98817 10 87930700 to 87930723 23 - TSS region transcription start site region 98817
Tssr95112 10 87930729 to 87930808 79 + TSS region transcription start site region 95112
Tssr98818 10 87930805 to 87930841 36 - TSS region transcription start site region 98818
Tssr95113 10 87930855 to 87930872 17 + TSS region transcription start site region 95113
Tssr98819 10 87930860 to 87930871 11 - TSS region transcription start site region 98819
Tssr95114 10 87930952 to 87930965 13 + TSS region transcription start site region 95114
Tssr95115 10 87931140 to 87931169 29 + TSS region transcription start site region 95115
Tssr95116 10 87931301 to 87931331 30 + TSS region transcription start site region 95116
Tssr95117 10 87931342 to 87931354 12 + TSS region transcription start site region 95117
Tssr95118 10 87931453 to 87931464 11 + TSS region transcription start site region 95118
Tssr95119 10 87931478 to 87931489 11 + TSS region transcription start site region 95119
Tssr95120 10 87931574 to 87931585 11 + TSS region transcription start site region 95120
Tssr95121 10 87932072 to 87932084 12 + TSS region transcription start site region 95121
Tssr95122 10 87932426 to 87932441 15 + TSS region transcription start site region 95122
Tssr95123 10 87932776 to 87932788 12 + TSS region transcription start site region 95123
Tssr95124 10 87932801 to 87932819 18 + TSS region transcription start site region 95124
Tssr95125 10 87933197 to 87933209 12 + TSS region transcription start site region 95125
Tssr95126 10 87933235 to 87933296 61 + TSS region transcription start site region 95126
Tssr95127 10 87933332 to 87933371 39 + TSS region transcription start site region 95127
Tssr95128 10 87933374 to 87933393 19 + TSS region transcription start site region 95128
Tssr95129 10 87933709 to 87933725 16 + TSS region transcription start site region 95129
Tssr95130 10 87933837 to 87933848 11 + TSS region transcription start site region 95130
Tssr95131 10 87934007 to 87934045 38 + TSS region transcription start site region 95131
Tssr95132 10 87934669 to 87934686 17 + TSS region transcription start site region 95132
Tssr95133 10 87934820 to 87934850 30 + TSS region transcription start site region 95133
Tssr95134 10 87935208 to 87935217 9 + TSS region transcription start site region 95134
Tssr95135 10 87935907 to 87935930 23 + TSS region transcription start site region 95135
Tssr95136 10 87935953 to 87935994 41 + TSS region transcription start site region 95136
Tssr95137 10 87936089 to 87936100 11 + TSS region transcription start site region 95137
Tssr95138 10 87937725 to 87937733 8 + TSS region transcription start site region 95138
Tssr98820 10 87957586 to 87957588 2 - TSS region transcription start site region 98820
Tyms-ps 10 87966847 to 87967761 914 + pseudogene thymidylate synthase, pseudogene
Gm48306 10 87980462 to 87984220 3758 + lincRNA gene predicted gene, 48306
Gm10763 10 88038224 to 88039678 1454 unclassified gene predicted gene 10763
Gm48307 10 88038225 to 88039679 1454 + unclassified gene predicted gene, 48307
Gm30233 10 88068073 to 88090347 22274 - lncRNA gene predicted gene, 30233
Gm48308 10 88088198 to 88089824 1626 + unclassified gene predicted gene, 48308
Tssr95139 10 88091070 to 88091076 6 + TSS region transcription start site region 95139
Pmch 10 88091072 to 88092374 1302 + protein coding gene pro-melanin-concentrating hormone
Parpbp 10 88091432 to 88146941 55509 - protein coding gene PARP1 binding protein
Gm6653 10 88134566 to 88135853 1287 - unclassified gene predicted gene 6653
Tssr98821 10 88135779 to 88135786 7 - TSS region transcription start site region 98821
Tssr98822 10 88135807 to 88135819 12 - TSS region transcription start site region 98822
Tssr98823 10 88135824 to 88135829 5 - TSS region transcription start site region 98823
Tssr98824 10 88135836 to 88135862 26 - TSS region transcription start site region 98824
Tssr95140 10 88135902 to 88135924 22 + TSS region transcription start site region 95140
4921515L22Rik 10 88135919 to 88137531 1612 + antisense lncRNA gene RIKEN cDNA 4921515L22 gene
Tssr95141 10 88135927 to 88135930 3 + TSS region transcription start site region 95141
Cpgi2077 10 88146557 to 88147352 795 CpG island CpG island 2077
Tssr98825 10 88146804 to 88146820 16 - TSS region transcription start site region 98825
Tssr98826 10 88146867 to 88146936 69 - TSS region transcription start site region 98826
Nup37 10 88146992 to 88178390 31398 + protein coding gene nucleoporin 37
Tssr95142 10 88146995 to 88147037 42 + TSS region transcription start site region 95142
Tssr95143 10 88147040 to 88147053 13 + TSS region transcription start site region 95143
Tssr95144 10 88147054 to 88147059 5 + TSS region transcription start site region 95144
Tssr95145 10 88147061 to 88147076 15 + TSS region transcription start site region 95145
Tssr95146 10 88162184 to 88162185 1 + TSS region transcription start site region 95146
Gm26357 10 88164959 to 88165073 114 - snRNA gene predicted gene, 26357
D10Mit94 10 88180636 to 88180785 149 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 94
Tssr95147 10 88201087 to 88201116 29 + TSS region transcription start site region 95147
Washc3 10 88201093 to 88246158 45065 + protein coding gene WASH complex subunit 3
Tssr95148 10 88201117 to 88201156 39 + TSS region transcription start site region 95148
Cpgi2078 10 88201124 to 88201320 196 CpG island CpG island 2078
Tssr95149 10 88201158 to 88201218 60 + TSS region transcription start site region 95149
Tssr95150 10 88201223 to 88201232 9 + TSS region transcription start site region 95150
Tssr95151 10 88204475 to 88204491 16 + TSS region transcription start site region 95151
Tssr3308 10 88224750 to 88224753 3 + TSS region transcription start site region 3308
Gm8415 10 88247418 to 88248635 1217 + pseudogene predicted gene 8415
Gm17980 10 88270883 to 88273231 2348 - pseudogene predicted gene, 17980
Gm48476 10 88309813 to 88310132 319 - pseudogene predicted gene, 48476
Dram1 10 88322801 to 88364383 41582 - protein coding gene DNA-damage regulated autophagy modulator 1
Tssr98827 10 88323130 to 88323151 21 - TSS region transcription start site region 98827
Tssr98828 10 88336164 to 88336189 25 - TSS region transcription start site region 98828
Cpgi2079 10 88336752 to 88337034 282 CpG island CpG island 2079
Tssr98829 10 88338627 to 88338630 3 - TSS region transcription start site region 98829
Tssr98830 10 88338668 to 88338681 13 - TSS region transcription start site region 98830
Tssr98831 10 88343936 to 88343977 41 - TSS region transcription start site region 98831
Tssr98832 10 88354421 to 88354427 6 - TSS region transcription start site region 98832
Cpgi2080 10 88356698 to 88357583 885 CpG island CpG island 2080
Tssr98833 10 88356970 to 88356985 15 - TSS region transcription start site region 98833
Tssr98834 10 88356990 to 88357122 132 - TSS region transcription start site region 98834
Tssr95152 10 88357184 to 88357204 20 + TSS region transcription start site region 95152
Gm40734 10 88357322 to 88371636 14314 + lncRNA gene predicted gene, 40734
Tssr98835 10 88357466 to 88357469 3 - TSS region transcription start site region 98835
Gm40733 10 88368052 to 88379133 11081 - lncRNA gene predicted gene, 40733
Cpgi2081 10 88378926 to 88379938 1012 CpG island CpG island 2081
Tssr98836 10 88379051 to 88379073 22 - TSS region transcription start site region 98836
Tssr95153 10 88379127 to 88379169 42 + TSS region transcription start site region 95153
Tssr95154 10 88379217 to 88379299 82 + TSS region transcription start site region 95154
Gnptab 10 88379232 to 88447330 68098 + protein coding gene N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits
Gm26546 10 88379244 to 88383711 4467 - lincRNA gene predicted gene, 26546
Tssr98837 10 88380156 to 88380180 24 - TSS region transcription start site region 98837
Tssr95155 10 88414063 to 88414069 6 + TSS region transcription start site region 95155
B430006N09Rik 10 88415501 to 88415888 387 unclassified non-coding RNA gene RIKEN cDNA B430006N09 gene
Tssr95156 10 88433998 to 88434009 11 + TSS region transcription start site region 95156
Tssr95157 10 88437480 to 88437492 12 + TSS region transcription start site region 95157
Gm16235 10 88444236 to 88449887 5651 - antisense lncRNA gene predicted gene 16235
Cpgi2082 10 88459340 to 88460088 748 CpG island CpG island 2082
Sycp3 10 88459587 to 88473236 13649 + protein coding gene synaptonemal complex protein 3
Tssr3309 10 88459591 to 88459615 24 + TSS region transcription start site region 3309
Tssr3310 10 88459620 to 88459639 19 + TSS region transcription start site region 3310
Tssr95158 10 88459656 to 88459670 14 + TSS region transcription start site region 95158
Chpt1 10 88469513 to 88503970 34457 - protein coding gene choline phosphotransferase 1
Tssr98838 10 88471150 to 88471185 35 - TSS region transcription start site region 98838
Tssr98839 10 88479487 to 88479491 4 - TSS region transcription start site region 98839
Cpgi2083 10 88503267 to 88504376 1109 CpG island CpG island 2083
Tssr98840 10 88503859 to 88503899 40 - TSS region transcription start site region 98840
Tssr98841 10 88503912 to 88503923 11 - TSS region transcription start site region 98841
Tssr98842 10 88503928 to 88503950 22 - TSS region transcription start site region 98842
Tssr98843 10 88503952 to 88503973 21 - TSS region transcription start site region 98843
Tssr98844 10 88504159 to 88504167 8 - TSS region transcription start site region 98844
Mybpc1 10 88518279 to 88605152 86873 - protein coding gene myosin binding protein C, slow-type