Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:87486920-87556937

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ascl1 10 87491041 to 87493660 2619 - protein coding gene achaete-scute family bHLH transcription factor 1
Tssr98805 10 87491459 to 87491486 27 - TSS region transcription start site region 98805
Tssr98806 10 87491863 to 87491874 11 - TSS region transcription start site region 98806
Cpgi2074 10 87492237 to 87494169 1932 CpG island CpG island 2074
Tssr98807 10 87492482 to 87492493 11 - TSS region transcription start site region 98807
Tssr98808 10 87492759 to 87492771 12 - TSS region transcription start site region 98808
Tssr98809 10 87492796 to 87492834 38 - TSS region transcription start site region 98809
Tssr98810 10 87493651 to 87493666 15 - TSS region transcription start site region 98810
Cpgi2075 10 87494675 to 87494943 268 CpG island CpG island 2075
Gm29915 10 87502828 to 87508622 5794 - lncRNA gene predicted gene, 29915
Gm48120 10 87507862 to 87508485 623 + pseudogene predicted gene, 48120
Tssr95020 10 87518931 to 87518936 5 + TSS region transcription start site region 95020
Pah 10 87521795 to 87584136 62341 + protein coding gene phenylalanine hydroxylase
Tssr95021 10 87521893 to 87521917 24 + TSS region transcription start site region 95021
Tssr95022 10 87521920 to 87521937 17 + TSS region transcription start site region 95022
Tssr95023 10 87521954 to 87521977 23 + TSS region transcription start site region 95023
Tssr95024 10 87533366 to 87533391 25 + TSS region transcription start site region 95024
Tssr95025 10 87548978 to 87549005 27 + TSS region transcription start site region 95025
D10Mit118 10 87550455 to 87550595 140 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 118