Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:87281440-87861748

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88 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sysbp1 10 10232521 to 87565233 77332712 QTL systolic blood pressure 1
4930555G07Rik 10 87230760 to 87297555 66795 + lincRNA gene RIKEN cDNA 4930555G07 gene
Gm10764 10 87289493 to 87291827 2334 + unclassified gene predicted gene 10764
Gm23191 10 87364040 to 87364146 106 - snRNA gene predicted gene, 23191
Tssr3307 10 87456136 to 87456161 25 + TSS region transcription start site region 3307
Cpgi2073 10 87486091 to 87486592 501 CpG island CpG island 2073
Ascl1 10 87491041 to 87493660 2619 - protein coding gene achaete-scute family bHLH transcription factor 1
Tssr98805 10 87491459 to 87491486 27 - TSS region transcription start site region 98805
Tssr98806 10 87491863 to 87491874 11 - TSS region transcription start site region 98806
Cpgi2074 10 87492237 to 87494169 1932 CpG island CpG island 2074
Tssr98807 10 87492482 to 87492493 11 - TSS region transcription start site region 98807
Tssr98808 10 87492759 to 87492771 12 - TSS region transcription start site region 98808
Tssr98809 10 87492796 to 87492834 38 - TSS region transcription start site region 98809
Tssr98810 10 87493651 to 87493666 15 - TSS region transcription start site region 98810
Cpgi2075 10 87494675 to 87494943 268 CpG island CpG island 2075
Gm29915 10 87502828 to 87508622 5794 - lncRNA gene predicted gene, 29915
Gm48120 10 87507862 to 87508485 623 + pseudogene predicted gene, 48120
Tssr95020 10 87518931 to 87518936 5 + TSS region transcription start site region 95020
Pah 10 87521795 to 87584136 62341 + protein coding gene phenylalanine hydroxylase
Tssr95021 10 87521893 to 87521917 24 + TSS region transcription start site region 95021
Tssr95022 10 87521920 to 87521937 17 + TSS region transcription start site region 95022
Tssr95023 10 87521954 to 87521977 23 + TSS region transcription start site region 95023
Tssr95024 10 87533366 to 87533391 25 + TSS region transcription start site region 95024
Tssr95025 10 87548978 to 87549005 27 + TSS region transcription start site region 95025
D10Mit118 10 87550455 to 87550595 140 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 118
Tssr95026 10 87562565 to 87562569 4 + TSS region transcription start site region 95026
D10Mit117 10 87565110 to 87565233 123 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 117
D10Mit229 10 87565376 to 87565523 147 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 229
Tssr95027 10 87566094 to 87566119 25 + TSS region transcription start site region 95027
2210420L05Rik 10 87571440 to 87571748 308 unclassified gene RIKEN cDNA 2210420L05 gene
Tssr95028 10 87573848 to 87573858 10 + TSS region transcription start site region 95028
Tssr95029 10 87581847 to 87581878 31 + TSS region transcription start site region 95029
Tssr95030 10 87679857 to 87679866 9 + TSS region transcription start site region 95030
Gm48195 10 87688578 to 87689029 451 + pseudogene predicted gene, 48195
D10Dcr10 10 87747862 to 87747957 95 DNA segment DNA Segment, Chr 10, Derry C. Roopenian 10
Tssr95031 10 87753809 to 87753856 47 + TSS region transcription start site region 95031
Gm20006 10 87759143 to 87759566 423 + pseudogene predicted gene, 20006
Gm30073 10 87777237 to 87798372 21135 - lncRNA gene predicted gene, 30073
Tssr98811 10 87809440 to 87809452 12 - TSS region transcription start site region 98811
Tssr98812 10 87809472 to 87809484 12 - TSS region transcription start site region 98812
Tssr95032 10 87817234 to 87817236 2 + TSS region transcription start site region 95032
Igf1os 10 87826377 to 87863381 37004 - antisense lncRNA gene insulin-like growth factor 1, opposite strand
n-TKctt21 10 87829886 to 87829958 72 - tRNA gene nuclear encoded tRNA lysine 21 (anticodon TTT)
Tssr98813 10 87830764 to 87830789 25 - TSS region transcription start site region 98813
Tssr95033 10 87830943 to 87830955 12 + TSS region transcription start site region 95033
Tssr95034 10 87853577 to 87853592 15 + TSS region transcription start site region 95034
Tssr95035 10 87858255 to 87858294 39 + TSS region transcription start site region 95035
Igf1 10 87858265 to 87937042 78777 + protein coding gene insulin-like growth factor 1
Tssr95036 10 87858602 to 87858620 18 + TSS region transcription start site region 95036
Tssr95037 10 87858639 to 87858649 10 + TSS region transcription start site region 95037
Tssr95038 10 87858656 to 87858665 9 + TSS region transcription start site region 95038
Tssr95039 10 87858681 to 87858695 14 + TSS region transcription start site region 95039
Tssr95040 10 87858816 to 87858832 16 + TSS region transcription start site region 95040
Tssr95041 10 87859046 to 87859057 11 + TSS region transcription start site region 95041
Tssr95042 10 87859062 to 87859094 32 + TSS region transcription start site region 95042
Tssr95043 10 87859107 to 87859126 19 + TSS region transcription start site region 95043
Tssr95044 10 87859158 to 87859178 20 + TSS region transcription start site region 95044
Tssr95045 10 87859180 to 87859195 15 + TSS region transcription start site region 95045
Tssr95046 10 87859199 to 87859216 17 + TSS region transcription start site region 95046
Tssr95047 10 87859233 to 87859244 11 + TSS region transcription start site region 95047
Tssr95048 10 87859255 to 87859266 11 + TSS region transcription start site region 95048
Tssr95049 10 87859279 to 87859288 9 + TSS region transcription start site region 95049
Tssr95050 10 87859291 to 87859302 11 + TSS region transcription start site region 95050
Tssr95051 10 87859310 to 87859334 24 + TSS region transcription start site region 95051
Tssr95052 10 87859335 to 87859336 1 + TSS region transcription start site region 95052
Tssr95053 10 87859356 to 87859367 11 + TSS region transcription start site region 95053
Tssr95054 10 87859372 to 87859387 15 + TSS region transcription start site region 95054
Tssr95055 10 87859481 to 87859492 11 + TSS region transcription start site region 95055
Tssr95056 10 87859535 to 87859572 37 + TSS region transcription start site region 95056
Tssr95057 10 87859593 to 87859612 19 + TSS region transcription start site region 95057
Tssr95058 10 87859636 to 87859647 11 + TSS region transcription start site region 95058
Tssr95059 10 87859698 to 87859707 9 + TSS region transcription start site region 95059
Tssr95060 10 87860062 to 87860086 24 + TSS region transcription start site region 95060
Tssr95061 10 87860144 to 87860159 15 + TSS region transcription start site region 95061
Tssr95062 10 87860166 to 87860179 13 + TSS region transcription start site region 95062
Cpgi2076 10 87860173 to 87860357 184 CpG island CpG island 2076
Tssr98814 10 87860200 to 87860202 2 - TSS region transcription start site region 98814
Tssr95063 10 87860221 to 87860240 19 + TSS region transcription start site region 95063
Tssr95064 10 87860249 to 87860267 18 + TSS region transcription start site region 95064
Tssr98815 10 87860355 to 87860365 10 - TSS region transcription start site region 98815
Tssr95065 10 87860437 to 87860464 27 + TSS region transcription start site region 95065
Tssr95066 10 87860477 to 87860492 15 + TSS region transcription start site region 95066
Tssr95067 10 87860824 to 87860830 6 + TSS region transcription start site region 95067
Tssr95068 10 87861006 to 87861031 25 + TSS region transcription start site region 95068
Tssr95069 10 87861077 to 87861109 32 + TSS region transcription start site region 95069
Tssr95070 10 87861295 to 87861306 11 + TSS region transcription start site region 95070
Tssr95071 10 87861309 to 87861338 29 + TSS region transcription start site region 95071
Igf1sl2 10 100100416 to 87858265 -12242151 QTL IGF-1 serum levels 2