Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:87069493-87511827

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
1700113H08Rik 10 87058045 to 87230589 172544 + protein coding gene RIKEN cDNA 1700113H08 gene
Tssr3306 10 87104858 to 87104860 2 + TSS region transcription start site region 3306
Tssr95017 10 87205952 to 87205999 47 + TSS region transcription start site region 95017
Tssr95018 10 87206004 to 87206009 5 + TSS region transcription start site region 95018
Tssr95019 10 87206011 to 87206037 26 + TSS region transcription start site region 95019
D10Mit301 10 87224349 to 87224597 248 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology 301
4930555G07Rik 10 87230760 to 87297555 66795 + lincRNA gene RIKEN cDNA 4930555G07 gene
Gm10764 10 87289493 to 87291827 2334 + unclassified gene predicted gene 10764
Gm23191 10 87364040 to 87364146 106 - snRNA gene predicted gene, 23191
Tssr3307 10 87456136 to 87456161 25 + TSS region transcription start site region 3307
Cpgi2073 10 87486091 to 87486592 501 CpG island CpG island 2073
Ascl1 10 87491041 to 87493660 2619 - protein coding gene achaete-scute family bHLH transcription factor 1
Tssr98805 10 87491459 to 87491486 27 - TSS region transcription start site region 98805
Tssr98806 10 87491863 to 87491874 11 - TSS region transcription start site region 98806
Cpgi2074 10 87492237 to 87494169 1932 CpG island CpG island 2074
Tssr98807 10 87492482 to 87492493 11 - TSS region transcription start site region 98807
Tssr98808 10 87492759 to 87492771 12 - TSS region transcription start site region 98808
Tssr98809 10 87492796 to 87492834 38 - TSS region transcription start site region 98809
Tssr98810 10 87493651 to 87493666 15 - TSS region transcription start site region 98810
Cpgi2075 10 87494675 to 87494943 268 CpG island CpG island 2075
Gm29915 10 87502828 to 87508622 5794 - lncRNA gene predicted gene, 29915
Gm48120 10 87507862 to 87508485 623 + pseudogene predicted gene, 48120