Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:86341861-86641882

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59 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Syn3 10 86055125 to 86498896 443771 - protein coding gene synapsin III
Timp3 10 86300412 to 86349505 49093 + protein coding gene tissue inhibitor of metalloproteinase 3
Tssr94970 10 86343938 to 86343957 19 + TSS region transcription start site region 94970
Tssr94971 10 86344553 to 86344562 9 + TSS region transcription start site region 94971
Tssr94972 10 86344597 to 86344617 20 + TSS region transcription start site region 94972
Tssr94973 10 86344626 to 86344647 21 + TSS region transcription start site region 94973
Tssr94974 10 86345820 to 86345840 20 + TSS region transcription start site region 94974
Tssr94975 10 86345851 to 86345867 16 + TSS region transcription start site region 94975
Tssr94976 10 86345895 to 86345947 52 + TSS region transcription start site region 94976
Tssr94977 10 86346016 to 86346024 8 + TSS region transcription start site region 94977
Tssr94978 10 86346042 to 86346084 42 + TSS region transcription start site region 94978
Tssr94979 10 86346117 to 86346138 21 + TSS region transcription start site region 94979
Tssr94980 10 86346145 to 86346163 18 + TSS region transcription start site region 94980
Tssr94981 10 86346228 to 86346244 16 + TSS region transcription start site region 94981
Tssr94982 10 86346533 to 86346543 10 + TSS region transcription start site region 94982
Tssr3303 10 86346883 to 86346924 41 + TSS region transcription start site region 3303
Tssr94983 10 86347203 to 86347214 11 + TSS region transcription start site region 94983
Tssr3304 10 86347242 to 86347257 15 + TSS region transcription start site region 3304
Tssr94984 10 86347330 to 86347357 27 + TSS region transcription start site region 94984
Tssr94985 10 86347363 to 86347379 16 + TSS region transcription start site region 94985
Tssr94986 10 86347505 to 86347523 18 + TSS region transcription start site region 94986
Tssr94987 10 86347538 to 86347549 11 + TSS region transcription start site region 94987
Tssr94988 10 86347551 to 86347566 15 + TSS region transcription start site region 94988
Tssr94989 10 86347668 to 86347687 19 + TSS region transcription start site region 94989
Tssr94990 10 86347813 to 86347825 12 + TSS region transcription start site region 94990
Tssr94991 10 86348077 to 86348091 14 + TSS region transcription start site region 94991
Tssr94992 10 86348129 to 86348169 40 + TSS region transcription start site region 94992
Tssr94993 10 86348205 to 86348223 18 + TSS region transcription start site region 94993
Tssr94994 10 86348353 to 86348368 15 + TSS region transcription start site region 94994
Tssr3305 10 86348435 to 86348444 9 + TSS region transcription start site region 3305
Tssr94995 10 86348474 to 86348486 12 + TSS region transcription start site region 94995
Tssr94996 10 86348965 to 86349004 39 + TSS region transcription start site region 94996
Tssr98766 10 86491861 to 86491882 21 - TSS region transcription start site region 98766
Tssr98767 10 86491891 to 86491905 14 - TSS region transcription start site region 98767
Tssr94997 10 86498284 to 86498292 8 + TSS region transcription start site region 94997
Cpgi2065 10 86498607 to 86499038 431 CpG island CpG island 2065
Tssr98768 10 86498836 to 86498858 22 - TSS region transcription start site region 98768
Tssr98769 10 86498872 to 86498909 37 - TSS region transcription start site region 98769
Gm6729 10 86526297 to 86541867 15570 - protein coding gene predicted gene 6729
Gm9583 10 86550808 to 86552650 1842 - pseudogene predicted gene 9583
Gm21027 10 86554947 to 86556182 1235 - pseudogene predicted gene, 21027
Gm48448 10 86569933 to 86571682 1749 + pseudogene predicted gene, 48448
Gm48450 10 86571763 to 86572966 1203 + pseudogene predicted gene, 48450
Gm48451 10 86573044 to 86574247 1203 + pseudogene predicted gene, 48451
Gm48454 10 86574323 to 86575528 1205 + pseudogene predicted gene, 48454
Gm48460 10 86575624 to 86575849 225 + pseudogene predicted gene, 48460
Tssr98770 10 86591497 to 86591519 22 - TSS region transcription start site region 98770
Gm46191 10 86593156 to 86593588 432 + pseudogene predicted gene, 46191
Gm48461 10 86600917 to 86601442 525 + pseudogene predicted gene, 48461
Gm48463 10 86601568 to 86601745 177 + pseudogene predicted gene, 48463
Gm48464 10 86601781 to 86602927 1146 + pseudogene predicted gene, 48464
Gm48465 10 86603008 to 86604202 1194 + pseudogene predicted gene, 48465
Gm48466 10 86604292 to 86604763 471 + pseudogene predicted gene, 48466
Gm48473 10 86620651 to 86620927 276 - pseudogene predicted gene, 48473
Gm48474 10 86620975 to 86622133 1158 - pseudogene predicted gene, 48474
Gm48475 10 86622256 to 86623999 1743 - pseudogene predicted gene, 48475
Cpgi2066 10 86636884 to 86637121 237 CpG island CpG island 2066
Gm19989 10 86637383 to 86638393 1010 + pseudogene predicted gene, 19989
Gm18876 10 86640683 to 86642531 1848 + pseudogene predicted gene, 18876