Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:85156848-85616860

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cry1 10 85131700 to 85185054 53354 - protein coding gene cryptochrome 1 (photolyase-like)
Cpgi2053 10 85184014 to 85185712 1698 CpG island CpG island 2053
Tssr98744 10 85184663 to 85184688 25 - TSS region transcription start site region 98744
Tssr98745 10 85185003 to 85185069 66 - TSS region transcription start site region 98745
Tssr94927 10 85185136 to 85185161 25 + TSS region transcription start site region 94927
Tssr98746 10 85198426 to 85198440 14 - TSS region transcription start site region 98746
Gm38575 10 85220942 to 85266392 45450 - lncRNA gene predicted gene, 38575
Tssr98747 10 85266304 to 85266330 26 - TSS region transcription start site region 98747
Tssr98748 10 85266334 to 85266354 20 - TSS region transcription start site region 98748
Gm27392 10 85284233 to 85284333 100 - miRNA gene predicted gene, 27392
Gm8394 10 85313488 to 85314439 951 + pseudogene predicted gene 8394
Gm34712 10 85332687 to 85347566 14879 - lncRNA gene predicted gene, 34712
Gm25281 10 85333901 to 85334004 103 + miRNA gene predicted gene, 25281
Gm40730 10 85339013 to 85339952 939 + lncRNA gene predicted gene, 40730
Cpgi2054 10 85386637 to 85388721 2084 CpG island CpG island 2054
Tssr94928 10 85386813 to 85386846 33 + TSS region transcription start site region 94928
Btbd11 10 85386814 to 85660292 273478 + protein coding gene BTB (POZ) domain containing 11
Tssr94929 10 85386848 to 85386860 12 + TSS region transcription start site region 94929
Tssr94930 10 85538583 to 85538627 44 + TSS region transcription start site region 94930
Tssr98749 10 85539511 to 85539524 13 - TSS region transcription start site region 98749
Tssr94931 10 85540164 to 85540202 38 + TSS region transcription start site region 94931
Tssr98750 10 85540441 to 85540447 6 - TSS region transcription start site region 98750
Tssr98751 10 85541603 to 85541616 13 - TSS region transcription start site region 98751
Gm40731 10 85578876 to 85583988 5112 - lncRNA gene predicted gene, 40731
Cpgi2055 10 85598200 to 85599057 857 CpG island CpG island 2055
Tssr94932 10 85598726 to 85598755 29 + TSS region transcription start site region 94932