Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:84817616-85118337

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rfx4 10 84756062 to 84906538 150476 + protein coding gene regulatory factor X, 4 (influences HLA class II expression)
Gm40728 10 84797949 to 84863288 65339 - lncRNA gene predicted gene, 40728
Tssr94914 10 84838103 to 84838134 31 + TSS region transcription start site region 94914
Tssr94915 10 84838143 to 84838153 10 + TSS region transcription start site region 94915
Tssr94916 10 84838160 to 84838174 14 + TSS region transcription start site region 94916
Tssr94917 10 84839067 to 84839068 1 + TSS region transcription start site region 94917
Cpgi2049 10 84844658 to 84844814 156 CpG island CpG island 2049
Cpgi2050 10 84917119 to 84918112 993 CpG island CpG island 2050
Tssr94918 10 84917269 to 84917295 26 + TSS region transcription start site region 94918
Tssr94919 10 84917556 to 84917594 38 + TSS region transcription start site region 94919
Ric8b 10 84917616 to 85018337 100721 + protein coding gene RIC8 guanine nucleotide exchange factor B
Tssr94920 10 84917619 to 84917655 36 + TSS region transcription start site region 94920
Tssr94921 10 84917657 to 84917692 35 + TSS region transcription start site region 94921
Tssr94922 10 84917703 to 84917716 13 + TSS region transcription start site region 94922
Gm34633 10 84987715 to 85003655 15940 - lncRNA gene predicted gene, 34633
Tssr98736 10 85003640 to 85003665 25 - TSS region transcription start site region 98736
Fhl4 10 85097019 to 85102495 5476 - protein coding gene four and a half LIM domains 4
Tssr98737 10 85099408 to 85099428 20 - TSS region transcription start site region 98737
Cpgi2051 10 85102118 to 85103748 1630 CpG island CpG island 2051
Tssr98738 10 85102425 to 85102434 9 - TSS region transcription start site region 98738
Tssr98739 10 85102441 to 85102471 30 - TSS region transcription start site region 98739
Tssr98740 10 85102487 to 85102549 62 - TSS region transcription start site region 98740
Tssr98741 10 85102552 to 85102565 13 - TSS region transcription start site region 98741
Tssr3298 10 85102588 to 85102607 19 + TSS region transcription start site region 3298
Tmem263 10 85102627 to 85117747 15120 + protein coding gene transmembrane protein 263
Tssr94923 10 85102697 to 85102719 22 + TSS region transcription start site region 94923
Tssr94924 10 85102737 to 85102748 11 + TSS region transcription start site region 94924
Tssr94925 10 85102758 to 85102833 75 + TSS region transcription start site region 94925
Tssr3299 10 85102842 to 85102847 5 + TSS region transcription start site region 3299
Tssr98742 10 85103657 to 85103664 7 - TSS region transcription start site region 98742
Tssr94926 10 85115986 to 85115994 8 + TSS region transcription start site region 94926