Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:84394592-84534742

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nuak1 10 84370900 to 84440471 69571 - protein coding gene NUAK family, SNF1-like kinase, 1
Tssr98712 10 84398655 to 84398667 12 - TSS region transcription start site region 98712
Cpgi2041 10 84440015 to 84441576 1561 CpG island CpG island 2041
Tssr98713 10 84440505 to 84440517 12 - TSS region transcription start site region 98713
Tssr98714 10 84440536 to 84440547 11 - TSS region transcription start site region 98714
Tssr98715 10 84440591 to 84440604 13 - TSS region transcription start site region 98715
Tssr98716 10 84440610 to 84440619 9 - TSS region transcription start site region 98716
Tssr98717 10 84440623 to 84440630 7 - TSS region transcription start site region 98717
Tssr98718 10 84440639 to 84440650 11 - TSS region transcription start site region 98718
Tssr98719 10 84440651 to 84440658 7 - TSS region transcription start site region 98719
Tssr98720 10 84440659 to 84440675 16 - TSS region transcription start site region 98720
Tssr98721 10 84440685 to 84440705 20 - TSS region transcription start site region 98721
Gm47962 10 84440826 to 84467009 26183 + bidirectional promoter lncRNA gene predicted gene, 47962
Tssr94888 10 84440826 to 84440850 24 + TSS region transcription start site region 94888
Tssr98722 10 84441300 to 84441360 60 - TSS region transcription start site region 98722
D10Mit208 10 84464592 to 84464742 150 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 208
Tssr94889 10 84488290 to 84488296 6 + TSS region transcription start site region 94889
4930463O16Rik 10 84488293 to 84497435 9142 + lincRNA gene RIKEN cDNA 4930463O16 gene
1700092E16Rik 10 84498874 to 84499626 752 + unclassified non-coding RNA gene RIKEN cDNA 1700092E16 gene
Gm34405 10 84500044 to 84517102 17058 - lncRNA gene predicted gene, 34405
Gm18251 10 84502032 to 84502269 237 - pseudogene predicted gene, 18251
Tssr94890 10 84516710 to 84516715 5 + TSS region transcription start site region 94890
Tssr3295 10 84517771 to 84517787 16 + TSS region transcription start site region 3295
Tssr94891 10 84517987 to 84518005 18 + TSS region transcription start site region 94891
E230014E18Rik 10 84518045 to 84523270 5225 + lincRNA gene RIKEN cDNA E230014E18 gene
Ckap4 10 84526305 to 84533888 7583 - protein coding gene cytoskeleton-associated protein 4
Tssr98723 10 84526833 to 84526844 11 - TSS region transcription start site region 98723
Tssr98724 10 84526972 to 84526987 15 - TSS region transcription start site region 98724
Tssr98725 10 84527343 to 84527367 24 - TSS region transcription start site region 98725
Tssr98726 10 84527587 to 84527609 22 - TSS region transcription start site region 98726
Tssr98727 10 84527704 to 84527719 15 - TSS region transcription start site region 98727
Cpgi2042 10 84533106 to 84534675 1569 CpG island CpG island 2042
Tssr98728 10 84533884 to 84533896 12 - TSS region transcription start site region 98728
Tssr98729 10 84533901 to 84533913 12 - TSS region transcription start site region 98729
Tssr98730 10 84533939 to 84533950 11 - TSS region transcription start site region 98730
Tssr98731 10 84533968 to 84534029 61 - TSS region transcription start site region 98731
Tssr94892 10 84534176 to 84534215 39 + TSS region transcription start site region 94892