Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Kidpq2 | 10 | 71415613 | QTL | kidney weight percentage QTL 2 | ||
Scfpq1 | 10 | 71415613 | QTL | subcutaneous fat pad percentage QTL 1 | ||
W3q11 | 10 | 71415613 | QTL | weight 3 weeks QTL 11 | ||
W10q5 | 10 | 71415613 | QTL | weight 10 weeks QTL 5 | ||
Lvrq4 | 10 | 71415613 | QTL | liver weight QTL 4 | ||
Hrtq3 | 10 | 71415613 | QTL | heart weight QTL 3 | ||
W6q6 | 10 | 71415613 | QTL | weight 6 weeks QTL 6 | ||
Egq7 | 10 | 71415613 | QTL | early growth QTL 7 | ||
Nfyb | 10 | 15443 | - | protein coding gene | nuclear transcription factor-Y beta | |
Cpgi2023 | 10 | 1319 | CpG island | CpG island 2023 | ||
Tssr98677 | 10 | 28 | - | TSS region | transcription start site region 98677 | |
Tssr98678 | 10 | 45 | - | TSS region | transcription start site region 98678 | |
Tssr98679 | 10 | 11 | - | TSS region | transcription start site region 98679 | |
Tssr98680 | 10 | 44 | - | TSS region | transcription start site region 98680 | |
Tssr98681 | 10 | 31 | - | TSS region | transcription start site region 98681 | |
Tssr98682 | 10 | 24 | - | TSS region | transcription start site region 98682 | |
Tssr94827 | 10 | 15 | + | TSS region | transcription start site region 94827 | |
Gm47560 | 10 | 161 | - | pseudogene | predicted gene, 47560 | |
Tssr98683 | 10 | 1 | - | TSS region | transcription start site region 98683 | |
Tssr94828 | 10 | 42 | + | TSS region | transcription start site region 94828 | |
Gm47561 | 10 | 6460 | + | lincRNA gene | predicted gene, 47561 | |
Tssr94829 | 10 | 30 | + | TSS region | transcription start site region 94829 | |
Tssr94830 | 10 | 30 | + | TSS region | transcription start site region 94830 | |
Cpgi2024 | 10 | 813 | CpG island | CpG island 2024 | ||
1700028I16Rik | 10 | 12119 | + | lincRNA gene | RIKEN cDNA 1700028I16 gene | |
Tssr94831 | 10 | 10 | + | TSS region | transcription start site region 94831 | |
Tssr98684 | 10 | 20 | - | TSS region | transcription start site region 98684 | |
Tssr94832 | 10 | 6 | + | TSS region | transcription start site region 94832 | |
Tssr94833 | 10 | 19 | + | TSS region | transcription start site region 94833 | |
Txnrd1 | 10 | 63761 | + | protein coding gene | thioredoxin reductase 1 | |
Tssr94834 | 10 | 10 | + | TSS region | transcription start site region 94834 | |
Tssr94835 | 10 | 9 | + | TSS region | transcription start site region 94835 | |
Gm38560 | 10 | 13275 | - | bidirectional promoter lncRNA gene | predicted gene, 38560 | |
Gm47073 | 10 | 1392 | - | unclassified gene | predicted gene, 47073 | |
Cpgi2025 | 10 | 676 | CpG island | CpG island 2025 | ||
Tssr98685 | 10 | 78 | - | TSS region | transcription start site region 98685 | |
Tssr94836 | 10 | 19 | + | TSS region | transcription start site region 94836 | |
Tssr94837 | 10 | 11 | + | TSS region | transcription start site region 94837 | |
Cpgi2026 | 10 | 722 | CpG island | CpG island 2026 | ||
Tssr94838 | 10 | 33 | + | TSS region | transcription start site region 94838 | |
Tssr94839 | 10 | 16 | + | TSS region | transcription start site region 94839 | |
Tssr94840 | 10 | 42 | + | TSS region | transcription start site region 94840 | |
Tssr94841 | 10 | 61 | + | TSS region | transcription start site region 94841 | |
Tssr94842 | 10 | 12 | + | TSS region | transcription start site region 94842 | |
Tssr94843 | 10 | 31 | + | TSS region | transcription start site region 94843 | |
Eid3 | 10 | 1304 | + | protein coding gene | EP300 interacting inhibitor of differentiation 3 | |
Tssr94844 | 10 | 26 | + | TSS region | transcription start site region 94844 | |
Cpgi2027 | 10 | 352 | CpG island | CpG island 2027 | ||
Tssr94845 | 10 | 31 | + | TSS region | transcription start site region 94845 | |
Tssr94846 | 10 | 23 | + | TSS region | transcription start site region 94846 | |
Tssr94847 | 10 | 13 | + | TSS region | transcription start site region 94847 | |
Tssr94848 | 10 | 31 | + | TSS region | transcription start site region 94848 | |
Tssr94849 | 10 | 33 | + | TSS region | transcription start site region 94849 | |
Tssr94850 | 10 | 28 | + | TSS region | transcription start site region 94850 | |
Tssr94851 | 10 | 15 | + | TSS region | transcription start site region 94851 | |
Tssr94852 | 10 | 16 | + | TSS region | transcription start site region 94852 | |
Tssr94853 | 10 | 13 | + | TSS region | transcription start site region 94853 | |
Tssr94854 | 10 | 16 | + | TSS region | transcription start site region 94854 | |
Tssr94855 | 10 | 9 | + | TSS region | transcription start site region 94855 | |
9130221J17Rik | 10 | 3634 | unclassified gene | RIKEN cDNA 9130221J17 gene | ||
Tssr94856 | 10 | 12 | + | TSS region | transcription start site region 94856 | |
Tssr94857 | 10 | 21 | + | TSS region | transcription start site region 94857 | |
Tssr94858 | 10 | 11 | + | TSS region | transcription start site region 94858 | |
Tssr94859 | 10 | 31 | + | TSS region | transcription start site region 94859 | |
Tssr94860 | 10 | 12 | + | TSS region | transcription start site region 94860 | |
Tssr94861 | 10 | 42 | + | TSS region | transcription start site region 94861 | |
Gm33781 | 10 | 7637 | - | lncRNA gene | predicted gene, 33781 | |
Cpgi2028 | 10 | 488 | CpG island | CpG island 2028 | ||
Gm4799 | 10 | 656 | + | pseudogene | predicted gene 4799 | |
Tssr94862 | 10 | 11 | + | TSS region | transcription start site region 94862 | |
Tssr98686 | 10 | 3 | - | TSS region | transcription start site region 98686 | |
Tssr98687 | 10 | 25 | - | TSS region | transcription start site region 98687 | |
Tssr94863 | 10 | 2 | + | TSS region | transcription start site region 94863 | |
Tssr98688 | 10 | 50 | - | TSS region | transcription start site region 98688 | |
Tssr98689 | 10 | 1 | - | TSS region | transcription start site region 98689 | |
Cpgi2029 | 10 | 1708 | CpG island | CpG island 2029 | ||
Tssr94864 | 10 | 36 | + | TSS region | transcription start site region 94864 | |
Tssr94865 | 10 | 52 | + | TSS region | transcription start site region 94865 | |
Tssr94866 | 10 | 11 | + | TSS region | transcription start site region 94866 | |
Tssr94867 | 10 | 31 | + | TSS region | transcription start site region 94867 | |
Chst11 | 10 | 210402 | + | protein coding gene | carbohydrate sulfotransferase 11 | |
Tssr3293 | 10 | 12 | - | TSS region | transcription start site region 3293 | |
Tssr94868 | 10 | 1 | + | TSS region | transcription start site region 94868 | |
Pwgrq19 | 10 | 9340328 | QTL | post-weaning growth rate QTL 19 | ||
Gm10773 | 10 | 3934 | - | protein coding gene | predicted gene 10773 | |
Tssr94869 | 10 | 1 | + | TSS region | transcription start site region 94869 | |
Tssr94870 | 10 | 3 | + | TSS region | transcription start site region 94870 | |
D10Mit227 | 10 | 113 | DNA segment | DNA segment, Chr 10, Massachusetts Institute of Technology 227 | ||
1700025N21Rik | 10 | 2888 | - | antisense lncRNA gene | RIKEN cDNA 1700025N21 gene | |
Tssr98690 | 10 | 11 | - | TSS region | transcription start site region 98690 | |
Gm23122 | 10 | 102 | - | snRNA gene | predicted gene, 23122 | |
D10Mit160 | 10 | 129 | DNA segment | DNA segment, Chr 10, Massachusetts Institute of Technology 160 | ||
Cpgi2030 | 10 | 536 | CpG island | CpG island 2030 | ||
Slc41a2 | 10 | 107034 | - | protein coding gene | solute carrier family 41, member 2 | |
Tssr98691 | 10 | 37 | - | TSS region | transcription start site region 98691 | |
Tssr98692 | 10 | 4 | - | TSS region | transcription start site region 98692 | |
Tssr98693 | 10 | 20 | - | TSS region | transcription start site region 98693 | |
Tssr98694 | 10 | 42 | - | TSS region | transcription start site region 98694 | |
Gm47170 | 10 | 635 | + | pseudogene | predicted gene, 47170 | |
Cpgi2031 | 10 | 1163 | CpG island | CpG island 2031 | ||
Tssr98695 | 10 | 15 | - | TSS region | transcription start site region 98695 | |
Tssr98696 | 10 | 25 | - | TSS region | transcription start site region 98696 | |
Tssr98697 | 10 | 49 | - | TSS region | transcription start site region 98697 | |
Tssr98698 | 10 | 23 | - | TSS region | transcription start site region 98698 | |
Tssr98699 | 10 | 35 | - | TSS region | transcription start site region 98699 | |
Tssr94871 | 10 | 5 | + | TSS region | transcription start site region 94871 | |
Gm40722 | 10 | 933 | + | lncRNA gene | predicted gene, 40722 | |
Tssr94872 | 10 | 41 | + | TSS region | transcription start site region 94872 | |
Tssr94873 | 10 | 4 | + | TSS region | transcription start site region 94873 | |
Gm40723 | 10 | 6566 | + | lincRNA gene | predicted gene, 40723 | |
Cpgi2032 | 10 | 1054 | CpG island | CpG island 2032 | ||
Tssr94874 | 10 | 58 | + | TSS region | transcription start site region 94874 | |
D10Wsu102e | 10 | 8614 | + | protein coding gene | DNA segment, Chr 10, Wayne State University 102, expressed | |
Gm8270 | 10 | 3248 | - | pseudogene | predicted gene 8270 | |
Aldh1l2 | 10 | 46690 | - | protein coding gene | aldehyde dehydrogenase 1 family, member L2 | |
Cpgi2033 | 10 | 959 | CpG island | CpG island 2033 | ||
Tssr98700 | 10 | 23 | - | TSS region | transcription start site region 98700 | |
Tssr98701 | 10 | 12 | - | TSS region | transcription start site region 98701 | |
Tssr98702 | 10 | 61 | - | TSS region | transcription start site region 98702 | |
Tssr98703 | 10 | 11 | - | TSS region | transcription start site region 98703 | |
Cpgi2034 | 10 | 996 | CpG island | CpG island 2034 | ||
Tssr98704 | 10 | 43 | - | TSS region | transcription start site region 98704 | |
Washc4 | 10 | 52532 | + | protein coding gene | WASH complex subunit 4 | |
Tssr94875 | 10 | 66 | + | TSS region | transcription start site region 94875 | |
Tssr94876 | 10 | 11 | + | TSS region | transcription start site region 94876 | |
Tssr94877 | 10 | 16 | + | TSS region | transcription start site region 94877 | |
Tssr94878 | 10 | 16 | + | TSS region | transcription start site region 94878 | |
Tssr94879 | 10 | 20 | + | TSS region | transcription start site region 94879 | |
Tssr94880 | 10 | 8 | + | TSS region | transcription start site region 94880 | |
Appl2 | 10 | 48705 | - | protein coding gene | adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2 | |
Tssr98705 | 10 | 4 | - | TSS region | transcription start site region 98705 | |
Tssr98706 | 10 | 9 | - | TSS region | transcription start site region 98706 | |
Tssr98707 | 10 | 10 | - | TSS region | transcription start site region 98707 | |
Tssr98708 | 10 | 40 | - | TSS region | transcription start site region 98708 | |
Cpgi2035 | 10 | 730 | CpG island | CpG island 2035 | ||
Tssr98709 | 10 | 27 | - | TSS region | transcription start site region 98709 | |
Tssr98710 | 10 | 51 | - | TSS region | transcription start site region 98710 | |
Tssr98711 | 10 | 18 | - | TSS region | transcription start site region 98711 | |
Gm47244 | 10 | 1346 | + | pseudogene | predicted gene, 47244 | |
Cpgi2036 | 10 | 234 | CpG island | CpG island 2036 | ||
Cpgi2037 | 10 | 841 | CpG island | CpG island 2037 | ||
1500009L16Rik | 10 | 39897 | + | protein coding gene | RIKEN cDNA 1500009L16 gene | |
Tssr94881 | 10 | 66 | + | TSS region | transcription start site region 94881 | |
Tssr94882 | 10 | 21 | + | TSS region | transcription start site region 94882 | |
Gm47245 | 10 | 1401 | - | pseudogene | predicted gene, 47245 | |
Cpgi2038 | 10 | 586 | CpG island | CpG island 2038 | ||
D10Mit314 | 10 | 124 | DNA segment | DNA Segment, Chr 10, Massachusetts Institute of Technology-314 | ||
D10Mit300 | 10 | 121 | DNA segment | DNA Segment, Chr 10, Massachusetts Institute of Technology 300 | ||
Gm47247 | 10 | 276 | + | pseudogene | predicted gene, 47247 | |
Gm33919 | 10 | 3891 | + | lncRNA gene | predicted gene, 33919 | |
Gm33980 | 10 | 2757 | - | lncRNA gene | predicted gene, 33980 | |
Gm34043 | 10 | 27106 | - | lncRNA gene | predicted gene, 34043 | |
Tssr94883 | 10 | 19 | + | TSS region | transcription start site region 94883 | |
Gm40725 | 10 | 15590 | + | lncRNA gene | predicted gene, 40725 | |
C230099D08Rik | 10 | 12132 | - | lincRNA gene | RIKEN cDNA C230099D08 gene | |
Gm40726 | 10 | 2694 | + | lncRNA gene | predicted gene, 40726 | |
Gm34184 | 10 | 64137 | - | lincRNA gene | predicted gene, 34184 | |
Gm37908 | 10 | 469 | + | unclassified gene | predicted gene, 37908 | |
Gm34113 | 10 | 3983 | + | lincRNA gene | predicted gene, 34113 | |
Gm40727 | 10 | 6047 | - | lncRNA gene | predicted gene, 40727 | |
Tssr94884 | 10 | 5 | + | TSS region | transcription start site region 94884 | |
D10Mit132b | 10 | 331 | DNA segment | DNA segment, Chr 10, Massachusetts Institute of Technology 132b | ||
D10Mit132a | 10 | 142 | DNA segment | DNA segment, Chr 10, Massachusetts Institute of Technology 132a | ||
Cpgi2039 | 10 | 239 | CpG island | CpG island 2039 | ||
Gm47253 | 10 | 30237 | - | lincRNA gene | predicted gene, 47253 | |
Tssr94885 | 10 | 1 | + | TSS region | transcription start site region 94885 | |
D10Mit65 | 10 | 134 | DNA segment | DNA segment, Chr 10, Massachusetts Institute of Technology 65 | ||
Tssr3294 | 10 | 3 | - | TSS region | transcription start site region 3294 | |
D10Mit201 | 10 | 156 | DNA segment | DNA segment, Chr 10, Massachusetts Institute of Technology 201 | ||
D10Mit131 | 10 | 142 | DNA segment | DNA segment, Chr 10, Massachusetts Institute of Technology 131 | ||
D10Mit131.1 | 10 | 195 | DNA segment | DNA segment, Chr 10, Massachusetts Institute of Technology 131.1 | ||
Tssr94886 | 10 | 19 | + | TSS region | transcription start site region 94886 | |
Tssr94887 | 10 | 11 | + | TSS region | transcription start site region 94887 | |
Gm5425 | 10 | 458 | + | pseudogene | predicted gene 5425 | |
Gm46201 | 10 | 18429 | - | lncRNA gene | predicted gene, 46201 | |
Cpgi2040 | 10 | 156 | CpG island | CpG island 2040 | ||
Nuak1 | 10 | 69571 | - | protein coding gene | NUAK family, SNF1-like kinase, 1 | |
Tssr98712 | 10 | 12 | - | TSS region | transcription start site region 98712 | |
Cpgi2041 | 10 | 1561 | CpG island | CpG island 2041 | ||
Tssr98713 | 10 | 12 | - | TSS region | transcription start site region 98713 | |
Tssr98714 | 10 | 11 | - | TSS region | transcription start site region 98714 | |
Tssr98715 | 10 | 13 | - | TSS region | transcription start site region 98715 | |
Tssr98716 | 10 | 9 | - | TSS region | transcription start site region 98716 | |
Tssr98717 | 10 | 7 | - | TSS region | transcription start site region 98717 | |
Tssr98718 | 10 | 11 | - | TSS region | transcription start site region 98718 | |
Tssr98719 | 10 | 7 | - | TSS region | transcription start site region 98719 | |
Tssr98720 | 10 | 16 | - | TSS region | transcription start site region 98720 | |
Tssr98721 | 10 | 20 | - | TSS region | transcription start site region 98721 | |
Gm47962 | 10 | 26183 | + | bidirectional promoter lncRNA gene | predicted gene, 47962 | |
Tssr94888 | 10 | 24 | + | TSS region | transcription start site region 94888 | |
Tssr98722 | 10 | 60 | - | TSS region | transcription start site region 98722 | |
D10Mit208 | 10 | 150 | DNA segment | DNA segment, Chr 10, Massachusetts Institute of Technology 208 | ||
Tssr94889 | 10 | 6 | + | TSS region | transcription start site region 94889 | |
4930463O16Rik | 10 | 9142 | + | lincRNA gene | RIKEN cDNA 4930463O16 gene | |
1700092E16Rik | 10 | 752 | + | unclassified non-coding RNA gene | RIKEN cDNA 1700092E16 gene | |
Gm34405 | 10 | 17058 | - | lncRNA gene | predicted gene, 34405 | |
Gm18251 | 10 | 237 | - | pseudogene | predicted gene, 18251 | |
Tssr94890 | 10 | 5 | + | TSS region | transcription start site region 94890 | |
Tssr3295 | 10 | 16 | + | TSS region | transcription start site region 3295 | |
Tssr94891 | 10 | 18 | + | TSS region | transcription start site region 94891 |