Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:82664036-82864080

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
jams1 10 79704491 to 82695872 2991381 heritable phenotypic marker juvenile audiogenic monogenic seizures 1
Glt8d2 10 82650433 to 82690650 40217 - protein coding gene glycosyltransferase 8 domain containing 2
Cpgi2021 10 82666602 to 82666901 299 CpG island CpG island 2021
Tssr98675 10 82690573 to 82690591 18 - TSS region transcription start site region 98675
Tssr98676 10 82690608 to 82690636 28 - TSS region transcription start site region 98676
D10Mit140 10 82695789 to 82695872 83 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 140
Hcfc2 10 82696160 to 82742428 46268 + protein coding gene host cell factor C2
Tssr94820 10 82697354 to 82697362 8 + TSS region transcription start site region 94820
Cpgi2022 10 82698666 to 82699961 1295 CpG island CpG island 2022
Tssr94821 10 82699097 to 82699149 52 + TSS region transcription start site region 94821
Tssr94822 10 82699159 to 82699170 11 + TSS region transcription start site region 94822
Tssr94823 10 82699183 to 82699197 14 + TSS region transcription start site region 94823
Tssr94824 10 82699209 to 82699218 9 + TSS region transcription start site region 94824
Tssr94825 10 82699229 to 82699238 9 + TSS region transcription start site region 94825
Tssr94826 10 82707959 to 82707964 5 + TSS region transcription start site region 94826
Nfyb 10 82748701 to 82764144 15443 - protein coding gene nuclear transcription factor-Y beta
Cpgi2023 10 82763368 to 82764687 1319 CpG island CpG island 2023
Tssr98677 10 82763868 to 82763896 28 - TSS region transcription start site region 98677
Tssr98678 10 82763904 to 82763949 45 - TSS region transcription start site region 98678
Tssr98679 10 82763964 to 82763975 11 - TSS region transcription start site region 98679
Tssr98680 10 82764036 to 82764080 44 - TSS region transcription start site region 98680
Tssr98681 10 82764088 to 82764119 31 - TSS region transcription start site region 98681
Tssr98682 10 82764133 to 82764157 24 - TSS region transcription start site region 98682
Tssr94827 10 82764262 to 82764277 15 + TSS region transcription start site region 94827
Gm47560 10 82769744 to 82769905 161 - pseudogene predicted gene, 47560
Tssr98683 10 82771129 to 82771130 1 - TSS region transcription start site region 98683
Tssr94828 10 82771310 to 82771352 42 + TSS region transcription start site region 94828
Gm47561 10 82771321 to 82777781 6460 + lincRNA gene predicted gene, 47561
Tssr94829 10 82795168 to 82795198 30 + TSS region transcription start site region 94829
Tssr94830 10 82795924 to 82795954 30 + TSS region transcription start site region 94830
Cpgi2024 10 82811818 to 82812631 813 CpG island CpG island 2024
1700028I16Rik 10 82812123 to 82824242 12119 + lincRNA gene RIKEN cDNA 1700028I16 gene
Tssr94831 10 82812199 to 82812209 10 + TSS region transcription start site region 94831
Tssr98684 10 82814133 to 82814153 20 - TSS region transcription start site region 98684
Tssr94832 10 82833891 to 82833897 6 + TSS region transcription start site region 94832
Tssr94833 10 82833926 to 82833945 19 + TSS region transcription start site region 94833
Txnrd1 10 82833951 to 82897712 63761 + protein coding gene thioredoxin reductase 1
Tssr94834 10 82833955 to 82833965 10 + TSS region transcription start site region 94834
Tssr94835 10 82833966 to 82833975 9 + TSS region transcription start site region 94835
Gm38560 10 82845733 to 82859008 13275 - bidirectional promoter lncRNA gene predicted gene, 38560
Gm47073 10 82851255 to 82852647 1392 - unclassified gene predicted gene, 47073
Cpgi2025 10 82858907 to 82859583 676 CpG island CpG island 2025
Tssr98685 10 82859053 to 82859131 78 - TSS region transcription start site region 98685
Tssr94836 10 82859198 to 82859217 19 + TSS region transcription start site region 94836
Tssr94837 10 82859221 to 82859232 11 + TSS region transcription start site region 94837
Cpgi2026 10 82860214 to 82860936 722 CpG island CpG island 2026
Tssr94838 10 82860247 to 82860280 33 + TSS region transcription start site region 94838
Tssr94839 10 82860283 to 82860299 16 + TSS region transcription start site region 94839
Tssr94840 10 82860301 to 82860343 42 + TSS region transcription start site region 94840
Tssr94841 10 82860489 to 82860550 61 + TSS region transcription start site region 94841