Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:82049208-82659673

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62 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Angvq1 10 46844307 to 82655287 35810980 QTL angiogenesis by VEGF QTL 1
Cia8 10 51617304 to 82655287 31037983 QTL collagen induced arthritis QTL 8
Obrq12 10 74151384 to 82655287 8503903 QTL obesity resistance QTL 12
Zfp873 10 82048123 to 82064745 16622 + protein coding gene zinc finger protein 873
Gm18556 10 82056108 to 82057101 993 - pseudogene predicted gene, 18556
D430050E20Rik 10 82083010 to 82083621 611 unclassified non-coding RNA gene RIKEN cDNA D430050E20 gene
Tssr94811 10 82083312 to 82083365 53 + TSS region transcription start site region 94811
Cpgi2014 10 82083337 to 82083582 245 CpG island CpG island 2014
BC024063 10 82083353 to 82111216 27863 + protein coding gene cDNA sequence BC024063
Tssr94812 10 82102185 to 82102194 9 + TSS region transcription start site region 94812
4921506L19Rik 10 82126675 to 82128286 1611 unclassified gene RIKEN cDNA 4921506L19 gene
Cpgi2015 10 82127826 to 82128401 575 CpG island CpG island 2015
Tssr94813 10 82127998 to 82128020 22 + TSS region transcription start site region 94813
AU041133 10 82128013 to 82153065 25052 + protein coding gene expressed sequence AU041133
Tssr94814 10 82128024 to 82128046 22 + TSS region transcription start site region 94814
Gm47572 10 82157101 to 82160461 3360 + unclassified gene predicted gene, 47572
Gm47573 10 82164247 to 82166784 2537 + unclassified gene predicted gene, 47573
Gm40720 10 82177630 to 82191292 13662 + lncRNA gene predicted gene, 40720
Cpgi2016 10 82178147 to 82178794 647 CpG island CpG island 2016
Tssr3291 10 82178325 to 82178345 20 + TSS region transcription start site region 3291
Gm15608 10 82194555 to 82201488 6933 + lincRNA gene predicted gene 15608
Gm3982 10 82219048 to 82224460 5412 + pseudogene predicted gene 3982
D10Ertd761e 10 82222278 to 82222498 220 DNA segment DNA segment, Chr 10, ERATO Doi 761, expressed
Zfp938 10 82224850 to 82241280 16430 - protein coding gene zinc finger protein 938
Cpgi2017 10 82240940 to 82241308 368 CpG island CpG island 2017
Tssr98664 10 82241271 to 82241290 19 - TSS region transcription start site region 98664
Tssr98665 10 82241293 to 82241304 11 - TSS region transcription start site region 98665
Gm47382 10 82266445 to 82266874 429 - pseudogene predicted gene, 47382
4932415D10Rik 10 82282116 to 82316582 34466 - protein coding gene RIKEN cDNA 4932415D10 gene
4933426I03Rik 10 82315374 to 82316558 1184 unclassified gene RIKEN cDNA 4933426I03 gene
Tssr98666 10 82316540 to 82316561 21 - TSS region transcription start site region 98666
Tssr98667 10 82354142 to 82354158 16 - TSS region transcription start site region 98667
Tssr98668 10 82354161 to 82354172 11 - TSS region transcription start site region 98668
Cpgi2018 10 82354208 to 82354673 465 CpG island CpG island 2018
Tssr94815 10 82354245 to 82354277 32 + TSS region transcription start site region 94815
Gm4924 10 82354255 to 82422882 68627 + protein coding gene predicted gene 4924
Tssr94816 10 82354278 to 82354296 18 + TSS region transcription start site region 94816
Gm8188 10 82430704 to 82432393 1689 + pseudogene predicted gene 8188
Gm47809 10 82442617 to 82442941 324 + pseudogene predicted gene, 47809
Gm1553 10 82486537 to 82492618 6081 - protein coding gene predicted gene 1553
Tssr98669 10 82492540 to 82492548 8 - TSS region transcription start site region 98669
Tssr98670 10 82492612 to 82492625 13 - TSS region transcription start site region 98670
Tssr98671 10 82492642 to 82492645 3 - TSS region transcription start site region 98671
Gm19186 10 82566772 to 82567507 735 + pseudogene predicted gene, 19186
Tssr94817 10 82569139 to 82569144 5 + TSS region transcription start site region 94817
Tssr3292 10 82578464 to 82578465 1 + TSS region transcription start site region 3292
Tssr94818 10 82585390 to 82585406 16 + TSS region transcription start site region 94818
Ap3m1-ps 10 82585426 to 82586683 1257 + pseudogene adaptor-related protein complex 3, mu 1 subunit, pseudogene
Gm40721 10 82613256 to 82618948 5692 - lncRNA gene predicted gene, 40721
1190007I07Rik 10 82619851 to 82623228 3377 - protein coding gene RIKEN cDNA 1190007I07 gene
Cpgi2019 10 82622739 to 82623460 721 CpG island CpG island 2019
Tssr98672 10 82623074 to 82623123 49 - TSS region transcription start site region 98672
Tssr98673 10 82623200 to 82623248 48 - TSS region transcription start site region 98673
Cpgi2020 10 82629392 to 82630400 1008 CpG island CpG island 2020
Tssr94819 10 82629803 to 82629818 15 + TSS region transcription start site region 94819
Tdg 10 82629821 to 82650494 20673 + protein coding gene thymine DNA glycosylase
Glt8d2 10 82650433 to 82690650 40217 - protein coding gene glycosyltransferase 8 domain containing 2
Insq9 10 82655104 to 82655287 183 QTL insulin QTL 9
El3 10 82655104 to 82655287 183 QTL epilepsy 3
Aem3 10 82655104 to 82655287 183 QTL anti-erythrocyte autoantibody modifier 3
D10Mit42 10 82655104 to 82655287 183 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 42
Ssrq4 10 82655104 to 91020240 8365136 QTL stress response QTL 4