Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:81580148-81640159

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tle2 10 81574561 to 81590845 16284 + protein coding gene transducin-like enhancer of split 2
Cpgi2003 10 81580286 to 81580809 523 CpG island CpG island 2003
Cpgi2004 10 81587702 to 81587877 175 CpG island CpG island 2004
Tle6 10 81590904 to 81601073 10169 - protein coding gene transducin-like enhancer of split 6
Cpgi2005 10 81594141 to 81594438 297 CpG island CpG island 2005
Gm32024 10 81594509 to 81599098 4589 + lncRNA gene predicted gene, 32024
Tssr98655 10 81596487 to 81596491 4 - TSS region transcription start site region 98655
Tssr3289 10 81596699 to 81596714 15 - TSS region transcription start site region 3289
Tssr98656 10 81597330 to 81597367 37 - TSS region transcription start site region 98656
Tssr98657 10 81597601 to 81597629 28 - TSS region transcription start site region 98657
Cpgi2006 10 81600834 to 81601349 515 CpG island CpG island 2006
Tssr98658 10 81600863 to 81600881 18 - TSS region transcription start site region 98658
Cpgi2007 10 81604766 to 81605232 466 CpG island CpG island 2007
Cpgi2008 10 81605865 to 81606682 817 CpG island CpG island 2008
BC025920 10 81606308 to 81609836 3528 + protein coding gene cDNA sequence BC025920
Gm26896 10 81606368 to 81609791 3423 - lincRNA gene predicted gene, 26896
Tssr94794 10 81610148 to 81610159 11 + TSS region transcription start site region 94794
Tssr94795 10 81620535 to 81620541 6 + TSS region transcription start site region 94795
Tssr94796 10 81620547 to 81620558 11 + TSS region transcription start site region 94796
Tssr94797 10 81620590 to 81620597 7 + TSS region transcription start site region 94797
Tssr94798 10 81620609 to 81620634 25 + TSS region transcription start site region 94798
Tssr94799 10 81621078 to 81621091 13 + TSS region transcription start site region 94799
Sirt6 10 81621786 to 81627797 6011 - protein coding gene sirtuin 6
Tssr98659 10 81622247 to 81622251 4 - TSS region transcription start site region 98659
Cpgi2009 10 81627231 to 81627873 642 CpG island CpG island 2009
Tssr98660 10 81627516 to 81627527 11 - TSS region transcription start site region 98660
Tssr98661 10 81627534 to 81627586 52 - TSS region transcription start site region 98661
Tssr98662 10 81627592 to 81627607 15 - TSS region transcription start site region 98662
Tssr94800 10 81627691 to 81627742 51 + TSS region transcription start site region 94800
Ankrd24 10 81628540 to 81647610 19070 + protein coding gene ankyrin repeat domain 24
Tssr94801 10 81628546 to 81628567 21 + TSS region transcription start site region 94801
Tssr94802 10 81628570 to 81628601 31 + TSS region transcription start site region 94802
Tssr3290 10 81628682 to 81628689 7 + TSS region transcription start site region 3290
Tssr94803 10 81628702 to 81628719 17 + TSS region transcription start site region 94803
Cpgi2010 10 81633254 to 81633943 689 CpG island CpG island 2010
Tssr94804 10 81633694 to 81633710 16 + TSS region transcription start site region 94804