Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:81480411-81571988

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72 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Celf5 10 81459227 to 81482709 23482 - protein coding gene CUGBP, Elav-like family member 5
Cpgi1992 10 81481796 to 81483101 1305 CpG island CpG island 1992
Tssr98622 10 81482093 to 81482113 20 - TSS region transcription start site region 98622
Tssr98623 10 81482114 to 81482150 36 - TSS region transcription start site region 98623
Tssr98624 10 81482333 to 81482353 20 - TSS region transcription start site region 98624
Tssr98625 10 81482637 to 81482644 7 - TSS region transcription start site region 98625
Tssr98626 10 81482648 to 81482653 5 - TSS region transcription start site region 98626
Tssr98627 10 81482655 to 81482725 70 - TSS region transcription start site region 98627
Ncln 10 81486249 to 81496392 10143 - protein coding gene nicalin
Tssr98628 10 81487185 to 81487229 44 - TSS region transcription start site region 98628
Cpgi1993 10 81495500 to 81496657 1157 CpG island CpG island 1993
Tssr98629 10 81496313 to 81496324 11 - TSS region transcription start site region 98629
Tssr98630 10 81496329 to 81496387 58 - TSS region transcription start site region 98630
S1pr4 10 81497747 to 81500132 2385 - protein coding gene sphingosine-1-phosphate receptor 4
Cpgi1994 10 81498520 to 81499626 1106 CpG island CpG island 1994
Tssr98631 10 81499596 to 81499608 12 - TSS region transcription start site region 98631
Tssr98632 10 81499622 to 81499643 21 - TSS region transcription start site region 98632
Tssr98633 10 81499650 to 81499670 20 - TSS region transcription start site region 98633
Tssr98634 10 81499686 to 81499713 27 - TSS region transcription start site region 98634
Gna15 10 81502306 to 81524225 21919 - protein coding gene guanine nucleotide binding protein, alpha 15
Cpgi1995 10 81502693 to 81503456 763 CpG island CpG island 1995
Gm16106 10 81504473 to 81504766 293 + pseudogene predicted gene 16106
Gm25595 10 81504622 to 81504718 96 + miRNA gene predicted gene, 25595
Tssr98635 10 81508066 to 81508099 33 - TSS region transcription start site region 98635
Tssr98636 10 81508150 to 81508189 39 - TSS region transcription start site region 98636
Tssr98637 10 81508202 to 81508227 25 - TSS region transcription start site region 98637
Tssr98638 10 81508919 to 81508965 46 - TSS region transcription start site region 98638
Tssr98639 10 81509096 to 81509105 9 - TSS region transcription start site region 98639
Tssr98640 10 81509280 to 81509287 7 - TSS region transcription start site region 98640
Cpgi1996 10 81512325 to 81512567 242 CpG island CpG island 1996
Tssr98641 10 81524079 to 81524098 19 - TSS region transcription start site region 98641
Tssr98642 10 81524106 to 81524127 21 - TSS region transcription start site region 98642
Tssr98643 10 81524130 to 81524139 9 - TSS region transcription start site region 98643
Tssr98644 10 81524248 to 81524259 11 - TSS region transcription start site region 98644
Tssr98645 10 81524271 to 81524285 14 - TSS region transcription start site region 98645
Tssr98646 10 81524300 to 81524317 17 - TSS region transcription start site region 98646
Tssr98647 10 81524335 to 81524346 11 - TSS region transcription start site region 98647
Tssr98648 10 81524381 to 81524390 9 - TSS region transcription start site region 98648
Tssr98649 10 81524408 to 81524409 1 - TSS region transcription start site region 98649
Tssr94770 10 81525374 to 81525387 13 + TSS region transcription start site region 94770
Tssr94771 10 81525395 to 81525419 24 + TSS region transcription start site region 94771
Gm47697 10 81525411 to 81526988 1577 + lincRNA gene predicted gene, 47697
Cpgi1997 10 81526775 to 81527139 364 CpG island CpG island 1997
Gna11 10 81528732 to 81545046 16314 - protein coding gene guanine nucleotide binding protein, alpha 11
Tssr98650 10 81530458 to 81530478 20 - TSS region transcription start site region 98650
Tssr98651 10 81530523 to 81530547 24 - TSS region transcription start site region 98651
Cpgi1998 10 81543941 to 81545761 1820 CpG island CpG island 1998
Tssr98652 10 81545056 to 81545169 113 - TSS region transcription start site region 98652
Tssr98653 10 81545175 to 81545192 17 - TSS region transcription start site region 98653
Cpgi1999 10 81559032 to 81560595 1563 CpG island CpG island 1999
Tssr94772 10 81559428 to 81559444 16 + TSS region transcription start site region 94772
Tssr94773 10 81559447 to 81559498 51 + TSS region transcription start site region 94773
Tle5 10 81559488 to 81566362 6874 + protein coding gene TLE family member 5, transcriptional modulator
Tssr94774 10 81559524 to 81559583 59 + TSS region transcription start site region 94774
Tssr94775 10 81559586 to 81559595 9 + TSS region transcription start site region 94775
Tssr3288 10 81559614 to 81559619 5 + TSS region transcription start site region 3288
Tssr94776 10 81561209 to 81561259 50 + TSS region transcription start site region 94776
Tssr94777 10 81563826 to 81563845 19 + TSS region transcription start site region 94777
Tssr94778 10 81564085 to 81564122 37 + TSS region transcription start site region 94778
Tssr94779 10 81564445 to 81564456 11 + TSS region transcription start site region 94779
Tssr94780 10 81564658 to 81564690 32 + TSS region transcription start site region 94780
Tssr94781 10 81565537 to 81565563 26 + TSS region transcription start site region 94781
Tssr94782 10 81565663 to 81565687 24 + TSS region transcription start site region 94782
Tssr94783 10 81565706 to 81565733 27 + TSS region transcription start site region 94783
Tssr98654 10 81565732 to 81565835 103 - TSS region transcription start site region 98654
Tssr94784 10 81565737 to 81565766 29 + TSS region transcription start site region 94784
Tssr94785 10 81565788 to 81565799 11 + TSS region transcription start site region 94785
Tssr94786 10 81565862 to 81565878 16 + TSS region transcription start site region 94786
Tssr94787 10 81565958 to 81565977 19 + TSS region transcription start site region 94787
Gm31936 10 81569046 to 81571795 2749 + lncRNA gene predicted gene, 31936
Cpgi2000 10 81570808 to 81571107 299 CpG island CpG island 2000
Cpgi2001 10 81571740 to 81571947 207 CpG island CpG island 2001