Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:81314026-81414038

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86 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pip5k1c 10 81292963 to 81319973 27010 + protein coding gene phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma
Tssr94733 10 81317875 to 81317892 17 + TSS region transcription start site region 94733
Tssr94734 10 81318024 to 81318028 4 + TSS region transcription start site region 94734
Tssr94735 10 81319502 to 81319540 38 + TSS region transcription start site region 94735
Tssr94736 10 81319689 to 81319727 38 + TSS region transcription start site region 94736
Cpgi1968 10 81319697 to 81321765 2068 CpG island CpG island 1968
Cactin 10 81321103 to 81326242 5139 + protein coding gene cactin, spliceosome C complex subunit
Tssr94737 10 81321187 to 81321247 60 + TSS region transcription start site region 94737
Tssr94738 10 81321255 to 81321270 15 + TSS region transcription start site region 94738
Tssr94739 10 81328686 to 81328704 18 + TSS region transcription start site region 94739
Tssr94740 10 81328719 to 81328739 20 + TSS region transcription start site region 94740
Tbxa2r 10 81328731 to 81335172 6441 + protein coding gene thromboxane A2 receptor
Cpgi1969 10 81332258 to 81333273 1015 CpG island CpG island 1969
Gipc3 10 81336541 to 81343744 7203 - protein coding gene GIPC PDZ domain containing family, member 3
Cpgi1970 10 81337742 to 81338397 655 CpG island CpG island 1970
Tssr94741 10 81340847 to 81340870 23 + TSS region transcription start site region 94741
Cpgi1971 10 81342869 to 81343707 838 CpG island CpG island 1971
Tssr3285 10 81343248 to 81343254 6 - TSS region transcription start site region 3285
Tssr98584 10 81343275 to 81343286 11 - TSS region transcription start site region 98584
Tssr98585 10 81343302 to 81343314 12 - TSS region transcription start site region 98585
Hmg20b 10 81346048 to 81350480 4432 - protein coding gene high mobility group 20B
Cpgi1972 10 81346160 to 81347458 1298 CpG island CpG island 1972
Tssr98586 10 81346702 to 81346770 68 - TSS region transcription start site region 98586
Tssr98587 10 81349227 to 81349240 13 - TSS region transcription start site region 98587
Cpgi1973 10 81349813 to 81351005 1192 CpG island CpG island 1973
Tssr98588 10 81350246 to 81350259 13 - TSS region transcription start site region 98588
Tssr98589 10 81350267 to 81350290 23 - TSS region transcription start site region 98589
Tssr98590 10 81350305 to 81350369 64 - TSS region transcription start site region 98590
Tssr98591 10 81350389 to 81350466 77 - TSS region transcription start site region 98591
Cpgi1974 10 81357092 to 81358455 1363 CpG island CpG island 1974
Tssr98592 10 81357376 to 81357393 17 - TSS region transcription start site region 98592
Mfsd12 10 81357491 to 81366225 8734 + protein coding gene major facilitator superfamily domain containing 12
Tssr94742 10 81357503 to 81357585 82 + TSS region transcription start site region 94742
Tssr98593 10 81358350 to 81358368 18 - TSS region transcription start site region 98593
Tssr98594 10 81358911 to 81358935 24 - TSS region transcription start site region 98594
Cpgi1975 10 81363831 to 81365444 1613 CpG island CpG island 1975
4930404N11Rik 10 81364024 to 81365820 1796 - protein coding gene RIKEN cDNA 4930404N11 gene
Tssr94743 10 81364026 to 81364038 12 + TSS region transcription start site region 94743
Tssr94744 10 81364285 to 81364301 16 + TSS region transcription start site region 94744
Tssr94745 10 81364320 to 81364372 52 + TSS region transcription start site region 94745
Tssr94746 10 81364397 to 81364414 17 + TSS region transcription start site region 94746
Tssr94747 10 81364415 to 81364426 11 + TSS region transcription start site region 94747
Tssr98595 10 81364846 to 81364859 13 - TSS region transcription start site region 98595
Tssr98596 10 81365784 to 81365801 17 - TSS region transcription start site region 98596
Tssr98597 10 81365807 to 81365825 18 - TSS region transcription start site region 98597
Tssr98598 10 81365834 to 81365843 9 - TSS region transcription start site region 98598
Fzr1 10 81366879 to 81378370 11491 - protein coding gene fizzy and cell division cycle 20 related 1
Cpgi1976 10 81377788 to 81379166 1378 CpG island CpG island 1976
Tssr3286 10 81378354 to 81378361 7 - TSS region transcription start site region 3286
Tssr98599 10 81378380 to 81378391 11 - TSS region transcription start site region 98599
Tssr98600 10 81378398 to 81378456 58 - TSS region transcription start site region 98600
Tssr98601 10 81378459 to 81378482 23 - TSS region transcription start site region 98601
Tssr98602 10 81378828 to 81378844 16 - TSS region transcription start site region 98602
Cpgi1977 10 81384084 to 81385117 1033 CpG island CpG island 1977
Tssr94748 10 81384418 to 81384452 34 + TSS region transcription start site region 94748
Dohh 10 81384428 to 81388352 3924 + protein coding gene deoxyhypusine hydroxylase/monooxygenase
Tssr94749 10 81384457 to 81384507 50 + TSS region transcription start site region 94749
Gm48551 10 81384466 to 81391560 7094 + protein coding gene predicted gene, 48551
Tssr98603 10 81385244 to 81385250 6 - TSS region transcription start site region 98603
Mir6913 10 81386347 to 81386412 65 + miRNA gene microRNA 6913
Gm48552 10 81389005 to 81391267 2262 + protein coding gene predicted gene, 48552
Tssr94750 10 81390311 to 81390326 15 + TSS region transcription start site region 94750
Tssr94751 10 81390339 to 81390369 30 + TSS region transcription start site region 94751
Tssr94752 10 81393043 to 81393058 15 + TSS region transcription start site region 94752
Smim24 10 81393064 to 81395079 2015 + protein coding gene small integral membrane protein 24
Tssr94753 10 81393610 to 81393688 78 + TSS region transcription start site region 94753
Tssr94754 10 81393690 to 81393701 11 + TSS region transcription start site region 94754
Tssr94755 10 81393830 to 81393841 11 + TSS region transcription start site region 94755
Tssr94756 10 81394090 to 81394110 20 + TSS region transcription start site region 94756
Tssr98604 10 81394799 to 81394820 21 - TSS region transcription start site region 98604
Tssr94757 10 81394807 to 81394824 17 + TSS region transcription start site region 94757
Tssr3287 10 81394828 to 81394839 11 - TSS region transcription start site region 3287
Tssr94758 10 81394910 to 81394924 14 + TSS region transcription start site region 94758
Tssr94759 10 81394996 to 81395052 56 + TSS region transcription start site region 94759
Tssr94760 10 81395086 to 81395101 15 + TSS region transcription start site region 94760
Tssr94761 10 81395267 to 81395274 7 + TSS region transcription start site region 94761
Nfic 10 81396191 to 81431133 34942 - protein coding gene nuclear factor I/C
Tssr94762 10 81396253 to 81396257 4 + TSS region transcription start site region 94762
Cpgi1978 10 81400160 to 81400702 542 CpG island CpG island 1978
Tssr98605 10 81404968 to 81405004 36 - TSS region transcription start site region 98605
Tssr98606 10 81406136 to 81406165 29 - TSS region transcription start site region 98606
Cpgi1979 10 81407384 to 81407816 432 CpG island CpG island 1979
Tssr98607 10 81407660 to 81407683 23 - TSS region transcription start site region 98607
Tssr94763 10 81409511 to 81409528 17 + TSS region transcription start site region 94763
Tssr94764 10 81409572 to 81409602 30 + TSS region transcription start site region 94764
Gm16104 10 81409575 to 81411579 2004 + antisense lncRNA gene predicted gene 16104