Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:81192824-81273628

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dapk3 10 81183005 to 81193197 10192 + protein coding gene death-associated protein kinase 3
Cpgi1953 10 81191858 to 81193433 1575 CpG island CpG island 1953
Cpgi1954 10 81194543 to 81194706 163 CpG island CpG island 1954
Tssr94716 10 81194600 to 81194607 7 + TSS region transcription start site region 94716
Tssr94717 10 81194684 to 81194700 16 + TSS region transcription start site region 94717
Atcayos 10 81194691 to 81208370 13679 + antisense lncRNA gene ataxia, cerebellar, Cayman type, opposite strand
Tssr94718 10 81195080 to 81195083 3 + TSS region transcription start site region 94718
Nmrk2 10 81198170 to 81202051 3881 - protein coding gene nicotinamide riboside kinase 2
Tssr98572 10 81202044 to 81202059 15 - TSS region transcription start site region 98572
Atcay 10 81204513 to 81230779 26266 - protein coding gene ataxia, cerebellar, Cayman type
Tssr94719 10 81207051 to 81207064 13 + TSS region transcription start site region 94719
Cpgi1955 10 81230375 to 81230732 357 CpG island CpG island 1955
Tssr98573 10 81230758 to 81230769 11 - TSS region transcription start site region 98573
Tssr98574 10 81230773 to 81230825 52 - TSS region transcription start site region 98574
Cpgi1956 10 81232824 to 81233628 804 CpG island CpG island 1956
Tssr94720 10 81233147 to 81233191 44 + TSS region transcription start site region 94720
Zfr2 10 81233155 to 81252123 18968 + protein coding gene zinc finger RNA binding protein 2
Cpgi1957 10 81239629 to 81240233 604 CpG island CpG island 1957
Cpgi1958 10 81244562 to 81244771 209 CpG island CpG island 1958
Matk 10 81252798 to 81262985 10187 + protein coding gene megakaryocyte-associated tyrosine kinase
Cpgi1959 10 81252967 to 81253366 399 CpG island CpG island 1959
Tssr94721 10 81257056 to 81257060 4 + TSS region transcription start site region 94721
Cpgi1960 10 81257155 to 81258212 1057 CpG island CpG island 1960
Tssr94722 10 81257277 to 81257309 32 + TSS region transcription start site region 94722
Tssr94723 10 81257316 to 81257333 17 + TSS region transcription start site region 94723
Tssr94724 10 81257347 to 81257362 15 + TSS region transcription start site region 94724
Tssr94725 10 81257456 to 81257526 70 + TSS region transcription start site region 94725
Tssr94726 10 81258148 to 81258167 19 + TSS region transcription start site region 94726
Mrpl54 10 81264722 to 81266926 2204 - protein coding gene mitochondrial ribosomal protein L54
Cpgi1961 10 81266435 to 81267069 634 CpG island CpG island 1961
Tssr94727 10 81266693 to 81266716 23 + TSS region transcription start site region 94727
Tssr98575 10 81266906 to 81266933 27 - TSS region transcription start site region 98575
Apba3 10 81266965 to 81273247 6282 + protein coding gene amyloid beta (A4) precursor protein-binding, family A, member 3
Cpgi1962 10 81268049 to 81268424 375 CpG island CpG island 1962
Tssr94728 10 81268176 to 81268205 29 + TSS region transcription start site region 94728
Tssr94729 10 81268207 to 81268270 63 + TSS region transcription start site region 94729
Mir3057 10 81271597 to 81271687 90 + miRNA gene microRNA 3057
Tjp3 10 81273207 to 81291581 18374 - protein coding gene tight junction protein 3