Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:81182824-81283628

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi1951 10 81182547 to 81183355 808 CpG island CpG island 1951
4930442H23Rik 10 81182605 to 81183849 1244 - unclassified gene RIKEN cDNA 4930442H23 gene
Tssr94711 10 81183000 to 81183048 48 + TSS region transcription start site region 94711
Dapk3 10 81183005 to 81193197 10192 + protein coding gene death-associated protein kinase 3
Tssr94712 10 81183056 to 81183070 14 + TSS region transcription start site region 94712
Tssr94713 10 81183222 to 81183273 51 + TSS region transcription start site region 94713
Tssr94714 10 81183284 to 81183329 45 + TSS region transcription start site region 94714
Cpgi1952 10 81189873 to 81190686 813 CpG island CpG island 1952
Cpgi1953 10 81191858 to 81193433 1575 CpG island CpG island 1953
Tssr94715 10 81192486 to 81192518 32 + TSS region transcription start site region 94715
Cpgi1954 10 81194543 to 81194706 163 CpG island CpG island 1954
Tssr94716 10 81194600 to 81194607 7 + TSS region transcription start site region 94716
Tssr94717 10 81194684 to 81194700 16 + TSS region transcription start site region 94717
Atcayos 10 81194691 to 81208370 13679 + antisense lncRNA gene ataxia, cerebellar, Cayman type, opposite strand
Tssr94718 10 81195080 to 81195083 3 + TSS region transcription start site region 94718
Nmrk2 10 81198170 to 81202051 3881 - protein coding gene nicotinamide riboside kinase 2
Tssr98572 10 81202044 to 81202059 15 - TSS region transcription start site region 98572
Atcay 10 81204513 to 81230779 26266 - protein coding gene ataxia, cerebellar, Cayman type
Tssr94719 10 81207051 to 81207064 13 + TSS region transcription start site region 94719
Cpgi1955 10 81230375 to 81230732 357 CpG island CpG island 1955
Tssr98573 10 81230758 to 81230769 11 - TSS region transcription start site region 98573
Tssr98574 10 81230773 to 81230825 52 - TSS region transcription start site region 98574
Cpgi1956 10 81232824 to 81233628 804 CpG island CpG island 1956
Tssr94720 10 81233147 to 81233191 44 + TSS region transcription start site region 94720
Zfr2 10 81233155 to 81252123 18968 + protein coding gene zinc finger RNA binding protein 2
Cpgi1957 10 81239629 to 81240233 604 CpG island CpG island 1957
Cpgi1958 10 81244562 to 81244771 209 CpG island CpG island 1958
Matk 10 81252798 to 81262985 10187 + protein coding gene megakaryocyte-associated tyrosine kinase
Cpgi1959 10 81252967 to 81253366 399 CpG island CpG island 1959
Tssr94721 10 81257056 to 81257060 4 + TSS region transcription start site region 94721
Cpgi1960 10 81257155 to 81258212 1057 CpG island CpG island 1960
Tssr94722 10 81257277 to 81257309 32 + TSS region transcription start site region 94722
Tssr94723 10 81257316 to 81257333 17 + TSS region transcription start site region 94723
Tssr94724 10 81257347 to 81257362 15 + TSS region transcription start site region 94724
Tssr94725 10 81257456 to 81257526 70 + TSS region transcription start site region 94725
Tssr94726 10 81258148 to 81258167 19 + TSS region transcription start site region 94726
Mrpl54 10 81264722 to 81266926 2204 - protein coding gene mitochondrial ribosomal protein L54
Cpgi1961 10 81266435 to 81267069 634 CpG island CpG island 1961
Tssr94727 10 81266693 to 81266716 23 + TSS region transcription start site region 94727
Tssr98575 10 81266906 to 81266933 27 - TSS region transcription start site region 98575
Apba3 10 81266965 to 81273247 6282 + protein coding gene amyloid beta (A4) precursor protein-binding, family A, member 3
Cpgi1962 10 81268049 to 81268424 375 CpG island CpG island 1962
Tssr94728 10 81268176 to 81268205 29 + TSS region transcription start site region 94728
Tssr94729 10 81268207 to 81268270 63 + TSS region transcription start site region 94729
Mir3057 10 81271597 to 81271687 90 + miRNA gene microRNA 3057
Tjp3 10 81273207 to 81291581 18374 - protein coding gene tight junction protein 3
Cpgi1963 10 81277113 to 81277410 297 CpG island CpG island 1963
Cpgi1964 10 81279133 to 81279349 216 CpG island CpG island 1964