Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:81178049-81358424

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117 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi1950 10 81176365 to 81178176 1811 CpG island CpG island 1950
Eef2 10 81176631 to 81182498 5867 + protein coding gene eukaryotic translation elongation factor 2
Tssr94698 10 81178049 to 81178088 39 + TSS region transcription start site region 94698
Snord37 10 81178961 to 81179013 52 + snoRNA gene small nucleolar RNA, C/D box 37
Tssr94699 10 81179150 to 81179205 55 + TSS region transcription start site region 94699
Tssr94700 10 81179334 to 81179349 15 + TSS region transcription start site region 94700
Tssr98570 10 81179378 to 81179413 35 - TSS region transcription start site region 98570
Tssr94701 10 81179394 to 81179418 24 + TSS region transcription start site region 94701
Tssr94702 10 81179571 to 81179583 12 + TSS region transcription start site region 94702
Tssr94703 10 81179634 to 81179648 14 + TSS region transcription start site region 94703
Tssr94704 10 81179653 to 81179674 21 + TSS region transcription start site region 94704
Tssr94705 10 81179681 to 81179739 58 + TSS region transcription start site region 94705
Tssr98571 10 81179746 to 81179779 33 - TSS region transcription start site region 98571
Tssr94706 10 81179873 to 81179907 34 + TSS region transcription start site region 94706
Tssr94707 10 81179923 to 81179962 39 + TSS region transcription start site region 94707
Tssr94708 10 81179988 to 81180018 30 + TSS region transcription start site region 94708
Tssr94709 10 81180242 to 81180276 34 + TSS region transcription start site region 94709
Tssr94710 10 81182400 to 81182410 10 + TSS region transcription start site region 94710
Tssr3283 10 81182427 to 81182462 35 + TSS region transcription start site region 3283
Cpgi1951 10 81182547 to 81183355 808 CpG island CpG island 1951
4930442H23Rik 10 81182605 to 81183849 1244 - unclassified gene RIKEN cDNA 4930442H23 gene
Tssr94711 10 81183000 to 81183048 48 + TSS region transcription start site region 94711
Dapk3 10 81183005 to 81193197 10192 + protein coding gene death-associated protein kinase 3
Tssr94712 10 81183056 to 81183070 14 + TSS region transcription start site region 94712
Tssr94713 10 81183222 to 81183273 51 + TSS region transcription start site region 94713
Tssr94714 10 81183284 to 81183329 45 + TSS region transcription start site region 94714
Cpgi1952 10 81189873 to 81190686 813 CpG island CpG island 1952
Cpgi1953 10 81191858 to 81193433 1575 CpG island CpG island 1953
Tssr94715 10 81192486 to 81192518 32 + TSS region transcription start site region 94715
Cpgi1954 10 81194543 to 81194706 163 CpG island CpG island 1954
Tssr94716 10 81194600 to 81194607 7 + TSS region transcription start site region 94716
Tssr94717 10 81194684 to 81194700 16 + TSS region transcription start site region 94717
Atcayos 10 81194691 to 81208370 13679 + antisense lncRNA gene ataxia, cerebellar, Cayman type, opposite strand
Tssr94718 10 81195080 to 81195083 3 + TSS region transcription start site region 94718
Nmrk2 10 81198170 to 81202051 3881 - protein coding gene nicotinamide riboside kinase 2
Tssr98572 10 81202044 to 81202059 15 - TSS region transcription start site region 98572
Atcay 10 81204513 to 81230779 26266 - protein coding gene ataxia, cerebellar, Cayman type
Tssr94719 10 81207051 to 81207064 13 + TSS region transcription start site region 94719
Cpgi1955 10 81230375 to 81230732 357 CpG island CpG island 1955
Tssr98573 10 81230758 to 81230769 11 - TSS region transcription start site region 98573
Tssr98574 10 81230773 to 81230825 52 - TSS region transcription start site region 98574
Cpgi1956 10 81232824 to 81233628 804 CpG island CpG island 1956
Tssr94720 10 81233147 to 81233191 44 + TSS region transcription start site region 94720
Zfr2 10 81233155 to 81252123 18968 + protein coding gene zinc finger RNA binding protein 2
Cpgi1957 10 81239629 to 81240233 604 CpG island CpG island 1957
Cpgi1958 10 81244562 to 81244771 209 CpG island CpG island 1958
Matk 10 81252798 to 81262985 10187 + protein coding gene megakaryocyte-associated tyrosine kinase
Cpgi1959 10 81252967 to 81253366 399 CpG island CpG island 1959
Tssr94721 10 81257056 to 81257060 4 + TSS region transcription start site region 94721
Cpgi1960 10 81257155 to 81258212 1057 CpG island CpG island 1960
Tssr94722 10 81257277 to 81257309 32 + TSS region transcription start site region 94722
Tssr94723 10 81257316 to 81257333 17 + TSS region transcription start site region 94723
Tssr94724 10 81257347 to 81257362 15 + TSS region transcription start site region 94724
Tssr94725 10 81257456 to 81257526 70 + TSS region transcription start site region 94725
Tssr94726 10 81258148 to 81258167 19 + TSS region transcription start site region 94726
Mrpl54 10 81264722 to 81266926 2204 - protein coding gene mitochondrial ribosomal protein L54
Cpgi1961 10 81266435 to 81267069 634 CpG island CpG island 1961
Tssr94727 10 81266693 to 81266716 23 + TSS region transcription start site region 94727
Tssr98575 10 81266906 to 81266933 27 - TSS region transcription start site region 98575
Apba3 10 81266965 to 81273247 6282 + protein coding gene amyloid beta (A4) precursor protein-binding, family A, member 3
Cpgi1962 10 81268049 to 81268424 375 CpG island CpG island 1962
Tssr94728 10 81268176 to 81268205 29 + TSS region transcription start site region 94728
Tssr94729 10 81268207 to 81268270 63 + TSS region transcription start site region 94729
Mir3057 10 81271597 to 81271687 90 + miRNA gene microRNA 3057
Tjp3 10 81273207 to 81291581 18374 - protein coding gene tight junction protein 3
Cpgi1963 10 81277113 to 81277410 297 CpG island CpG island 1963
Cpgi1964 10 81279133 to 81279349 216 CpG island CpG island 1964
Cpgi1965 10 81285446 to 81286333 887 CpG island CpG island 1965
Tssr98576 10 81285763 to 81285798 35 - TSS region transcription start site region 98576
Tssr98577 10 81291180 to 81291198 18 - TSS region transcription start site region 98577
Tssr98578 10 81291207 to 81291221 14 - TSS region transcription start site region 98578
Tssr98579 10 81291227 to 81291282 55 - TSS region transcription start site region 98579
Tssr98580 10 81291500 to 81291526 26 - TSS region transcription start site region 98580
Cpgi1966 10 81292538 to 81293869 1331 CpG island CpG island 1966
Tssr94730 10 81292961 to 81293005 44 + TSS region transcription start site region 94730
Pip5k1c 10 81292963 to 81319973 27010 + protein coding gene phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma
Tssr94731 10 81293014 to 81293027 13 + TSS region transcription start site region 94731
Tssr94732 10 81297354 to 81297370 16 + TSS region transcription start site region 94732
Tssr98581 10 81298791 to 81298841 50 - TSS region transcription start site region 98581
Gm16315 10 81301701 to 81302917 1216 - antisense lncRNA gene predicted gene 16315
Tssr3284 10 81302053 to 81302056 3 - TSS region transcription start site region 3284
Tssr98582 10 81302921 to 81302941 20 - TSS region transcription start site region 98582
Cpgi1967 10 81302926 to 81303171 245 CpG island CpG island 1967
Tssr98583 10 81303510 to 81303546 36 - TSS region transcription start site region 98583
Tssr94733 10 81317875 to 81317892 17 + TSS region transcription start site region 94733
Tssr94734 10 81318024 to 81318028 4 + TSS region transcription start site region 94734
Tssr94735 10 81319502 to 81319540 38 + TSS region transcription start site region 94735
Tssr94736 10 81319689 to 81319727 38 + TSS region transcription start site region 94736
Cpgi1968 10 81319697 to 81321765 2068 CpG island CpG island 1968
Cactin 10 81321103 to 81326242 5139 + protein coding gene cactin, spliceosome C complex subunit
Tssr94737 10 81321187 to 81321247 60 + TSS region transcription start site region 94737
Tssr94738 10 81321255 to 81321270 15 + TSS region transcription start site region 94738
Tssr94739 10 81328686 to 81328704 18 + TSS region transcription start site region 94739
Tssr94740 10 81328719 to 81328739 20 + TSS region transcription start site region 94740
Tbxa2r 10 81328731 to 81335172 6441 + protein coding gene thromboxane A2 receptor
Cpgi1969 10 81332258 to 81333273 1015 CpG island CpG island 1969
Gipc3 10 81336541 to 81343744 7203 - protein coding gene GIPC PDZ domain containing family, member 3
Cpgi1970 10 81337742 to 81338397 655 CpG island CpG island 1970
Tssr94741 10 81340847 to 81340870 23 + TSS region transcription start site region 94741
Cpgi1971 10 81342869 to 81343707 838 CpG island CpG island 1971
Tssr3285 10 81343248 to 81343254 6 - TSS region transcription start site region 3285
Tssr98584 10 81343275 to 81343286 11 - TSS region transcription start site region 98584
Tssr98585 10 81343302 to 81343314 12 - TSS region transcription start site region 98585
Hmg20b 10 81346048 to 81350480 4432 - protein coding gene high mobility group 20B
Cpgi1972 10 81346160 to 81347458 1298 CpG island CpG island 1972
Tssr98586 10 81346702 to 81346770 68 - TSS region transcription start site region 98586
Tssr98587 10 81349227 to 81349240 13 - TSS region transcription start site region 98587
Cpgi1973 10 81349813 to 81351005 1192 CpG island CpG island 1973
Tssr98588 10 81350246 to 81350259 13 - TSS region transcription start site region 98588
Tssr98589 10 81350267 to 81350290 23 - TSS region transcription start site region 98589
Tssr98590 10 81350305 to 81350369 64 - TSS region transcription start site region 98590
Tssr98591 10 81350389 to 81350466 77 - TSS region transcription start site region 98591
Cpgi1974 10 81357092 to 81358455 1363 CpG island CpG island 1974
Tssr98592 10 81357376 to 81357393 17 - TSS region transcription start site region 98592
Mfsd12 10 81357491 to 81366225 8734 + protein coding gene major facilitator superfamily domain containing 12
Tssr94742 10 81357503 to 81357585 82 + TSS region transcription start site region 94742
Tssr98593 10 81358350 to 81358368 18 - TSS region transcription start site region 98593