Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:81144923-81214962

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64 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zbtb7a 10 81135225 to 81152222 16997 + protein coding gene zinc finger and BTB domain containing 7a
Cpgi1944 10 81147837 to 81148662 825 CpG island CpG island 1944
Tssr94688 10 81148411 to 81148427 16 + TSS region transcription start site region 94688
Tssr98563 10 81148420 to 81148432 12 - TSS region transcription start site region 98563
Tssr94689 10 81149253 to 81149297 44 + TSS region transcription start site region 94689
Tssr94690 10 81150701 to 81150738 37 + TSS region transcription start site region 94690
Tssr94691 10 81151001 to 81151013 12 + TSS region transcription start site region 94691
Tssr94692 10 81151460 to 81151474 14 + TSS region transcription start site region 94692
Tssr98564 10 81151729 to 81151775 46 - TSS region transcription start site region 98564
Cpgi1945 10 81153348 to 81154625 1277 CpG island CpG island 1945
Pias4 10 81153961 to 81167720 13759 - protein coding gene protein inhibitor of activated STAT 4
Tssr3282 10 81160717 to 81160720 3 + TSS region transcription start site region 3282
Cpgi1946 10 81167011 to 81168043 1032 CpG island CpG island 1946
Tssr98565 10 81167710 to 81167754 44 - TSS region transcription start site region 98565
Tssr98566 10 81167770 to 81167781 11 - TSS region transcription start site region 98566
Tssr98567 10 81167838 to 81167849 11 - TSS region transcription start site region 98567
Tssr98568 10 81167896 to 81167905 9 - TSS region transcription start site region 98568
Tssr94693 10 81168022 to 81168040 18 + TSS region transcription start site region 94693
Cpgi1947 10 81168879 to 81169183 304 CpG island CpG island 1947
Tssr98569 10 81168880 to 81168884 4 - TSS region transcription start site region 98569
Cpgi1948 10 81173161 to 81173476 315 CpG island CpG island 1948
Tssr94694 10 81173303 to 81173327 24 + TSS region transcription start site region 94694
Cpgi1949 10 81174705 to 81175125 420 CpG island CpG island 1949
Cpgi1950 10 81176365 to 81178176 1811 CpG island CpG island 1950
Eef2 10 81176631 to 81182498 5867 + protein coding gene eukaryotic translation elongation factor 2
Tssr94695 10 81176643 to 81176648 5 + TSS region transcription start site region 94695
Tssr94696 10 81177693 to 81177737 44 + TSS region transcription start site region 94696
Tssr94697 10 81177809 to 81177837 28 + TSS region transcription start site region 94697
Tssr94698 10 81178049 to 81178088 39 + TSS region transcription start site region 94698
Snord37 10 81178961 to 81179013 52 + snoRNA gene small nucleolar RNA, C/D box 37
Tssr94699 10 81179150 to 81179205 55 + TSS region transcription start site region 94699
Tssr94700 10 81179334 to 81179349 15 + TSS region transcription start site region 94700
Tssr98570 10 81179378 to 81179413 35 - TSS region transcription start site region 98570
Tssr94701 10 81179394 to 81179418 24 + TSS region transcription start site region 94701
Tssr94702 10 81179571 to 81179583 12 + TSS region transcription start site region 94702
Tssr94703 10 81179634 to 81179648 14 + TSS region transcription start site region 94703
Tssr94704 10 81179653 to 81179674 21 + TSS region transcription start site region 94704
Tssr94705 10 81179681 to 81179739 58 + TSS region transcription start site region 94705
Tssr98571 10 81179746 to 81179779 33 - TSS region transcription start site region 98571
Tssr94706 10 81179873 to 81179907 34 + TSS region transcription start site region 94706
Tssr94707 10 81179923 to 81179962 39 + TSS region transcription start site region 94707
Tssr94708 10 81179988 to 81180018 30 + TSS region transcription start site region 94708
Tssr94709 10 81180242 to 81180276 34 + TSS region transcription start site region 94709
Tssr94710 10 81182400 to 81182410 10 + TSS region transcription start site region 94710
Tssr3283 10 81182427 to 81182462 35 + TSS region transcription start site region 3283
Cpgi1951 10 81182547 to 81183355 808 CpG island CpG island 1951
4930442H23Rik 10 81182605 to 81183849 1244 - unclassified gene RIKEN cDNA 4930442H23 gene
Tssr94711 10 81183000 to 81183048 48 + TSS region transcription start site region 94711
Dapk3 10 81183005 to 81193197 10192 + protein coding gene death-associated protein kinase 3
Tssr94712 10 81183056 to 81183070 14 + TSS region transcription start site region 94712
Tssr94713 10 81183222 to 81183273 51 + TSS region transcription start site region 94713
Tssr94714 10 81183284 to 81183329 45 + TSS region transcription start site region 94714
Cpgi1952 10 81189873 to 81190686 813 CpG island CpG island 1952
Cpgi1953 10 81191858 to 81193433 1575 CpG island CpG island 1953
Tssr94715 10 81192486 to 81192518 32 + TSS region transcription start site region 94715
Cpgi1954 10 81194543 to 81194706 163 CpG island CpG island 1954
Tssr94716 10 81194600 to 81194607 7 + TSS region transcription start site region 94716
Tssr94717 10 81194684 to 81194700 16 + TSS region transcription start site region 94717
Atcayos 10 81194691 to 81208370 13679 + antisense lncRNA gene ataxia, cerebellar, Cayman type, opposite strand
Tssr94718 10 81195080 to 81195083 3 + TSS region transcription start site region 94718
Nmrk2 10 81198170 to 81202051 3881 - protein coding gene nicotinamide riboside kinase 2
Tssr98572 10 81202044 to 81202059 15 - TSS region transcription start site region 98572
Atcay 10 81204513 to 81230779 26266 - protein coding gene ataxia, cerebellar, Cayman type
Tssr94719 10 81207051 to 81207064 13 + TSS region transcription start site region 94719