Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:81078995-81179693

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76 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Thop1 10 81070083 to 81082360 12277 + protein coding gene thimet oligopeptidase 1
Cpgi1939 10 81080029 to 81080638 609 CpG island CpG island 1939
Creb3l3 10 81084333 to 81098872 14539 - protein coding gene cAMP responsive element binding protein 3-like 3
Tssr98554 10 81089333 to 81089342 9 - TSS region transcription start site region 98554
Tssr98555 10 81092540 to 81092546 6 - TSS region transcription start site region 98555
Tssr98556 10 81092554 to 81092561 7 - TSS region transcription start site region 98556
Tssr98557 10 81092575 to 81092633 58 - TSS region transcription start site region 98557
Tssr98558 10 81092653 to 81092664 11 - TSS region transcription start site region 98558
D10Mit7 10 81098438 to 81098583 145 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 7
Tssr94670 10 81102683 to 81102688 5 + TSS region transcription start site region 94670
Mir5615-1 10 81104614 to 81104673 59 - miRNA gene microRNA 5615-1
Mir5615-2 10 81104616 to 81104675 59 + miRNA gene microRNA 5615-2
Cpgi1940 10 81105396 to 81106840 1444 CpG island CpG island 1940
Tssr98559 10 81105841 to 81105883 42 - TSS region transcription start site region 98559
Map2k2 10 81105912 to 81124697 18785 + protein coding gene mitogen-activated protein kinase kinase 2
Tssr94671 10 81105918 to 81105932 14 + TSS region transcription start site region 94671
Tssr94672 10 81105933 to 81106004 71 + TSS region transcription start site region 94672
Tssr94673 10 81118124 to 81118159 35 + TSS region transcription start site region 94673
Tssr94674 10 81120933 to 81120986 53 + TSS region transcription start site region 94674
Tssr94675 10 81123818 to 81123825 7 + TSS region transcription start site region 94675
Tssr94676 10 81128975 to 81128998 23 + TSS region transcription start site region 94676
Cpgi1941 10 81128995 to 81129693 698 CpG island CpG island 1941
Tssr98560 10 81129048 to 81129085 37 - TSS region transcription start site region 98560
Tssr98561 10 81129450 to 81129461 11 - TSS region transcription start site region 98561
Cpgi1942 10 81134213 to 81134486 273 CpG island CpG island 1942
Tssr98562 10 81134377 to 81134419 42 - TSS region transcription start site region 98562
Tssr94677 10 81134464 to 81134495 31 + TSS region transcription start site region 94677
Cpgi1943 10 81135151 to 81138771 3620 CpG island CpG island 1943
Zbtb7a 10 81135225 to 81152222 16997 + protein coding gene zinc finger and BTB domain containing 7a
Tssr94678 10 81135273 to 81135291 18 + TSS region transcription start site region 94678
Tssr94679 10 81135464 to 81135491 27 + TSS region transcription start site region 94679
Tssr94680 10 81136223 to 81136267 44 + TSS region transcription start site region 94680
Tssr94681 10 81136331 to 81136382 51 + TSS region transcription start site region 94681
Tssr94682 10 81136503 to 81136516 13 + TSS region transcription start site region 94682
Tssr94683 10 81136534 to 81136608 74 + TSS region transcription start site region 94683
Tssr94684 10 81137720 to 81137744 24 + TSS region transcription start site region 94684
Tssr94685 10 81137980 to 81137992 12 + TSS region transcription start site region 94685
Tssr94686 10 81138004 to 81138021 17 + TSS region transcription start site region 94686
Tssr94687 10 81139505 to 81139512 7 + TSS region transcription start site region 94687
Cpgi1944 10 81147837 to 81148662 825 CpG island CpG island 1944
Tssr94688 10 81148411 to 81148427 16 + TSS region transcription start site region 94688
Tssr98563 10 81148420 to 81148432 12 - TSS region transcription start site region 98563
Tssr94689 10 81149253 to 81149297 44 + TSS region transcription start site region 94689
Tssr94690 10 81150701 to 81150738 37 + TSS region transcription start site region 94690
Tssr94691 10 81151001 to 81151013 12 + TSS region transcription start site region 94691
Tssr94692 10 81151460 to 81151474 14 + TSS region transcription start site region 94692
Tssr98564 10 81151729 to 81151775 46 - TSS region transcription start site region 98564
Cpgi1945 10 81153348 to 81154625 1277 CpG island CpG island 1945
Pias4 10 81153961 to 81167720 13759 - protein coding gene protein inhibitor of activated STAT 4
Tssr3282 10 81160717 to 81160720 3 + TSS region transcription start site region 3282
Cpgi1946 10 81167011 to 81168043 1032 CpG island CpG island 1946
Tssr98565 10 81167710 to 81167754 44 - TSS region transcription start site region 98565
Tssr98566 10 81167770 to 81167781 11 - TSS region transcription start site region 98566
Tssr98567 10 81167838 to 81167849 11 - TSS region transcription start site region 98567
Tssr98568 10 81167896 to 81167905 9 - TSS region transcription start site region 98568
Tssr94693 10 81168022 to 81168040 18 + TSS region transcription start site region 94693
Cpgi1947 10 81168879 to 81169183 304 CpG island CpG island 1947
Tssr98569 10 81168880 to 81168884 4 - TSS region transcription start site region 98569
Cpgi1948 10 81173161 to 81173476 315 CpG island CpG island 1948
Tssr94694 10 81173303 to 81173327 24 + TSS region transcription start site region 94694
Cpgi1949 10 81174705 to 81175125 420 CpG island CpG island 1949
Cpgi1950 10 81176365 to 81178176 1811 CpG island CpG island 1950
Eef2 10 81176631 to 81182498 5867 + protein coding gene eukaryotic translation elongation factor 2
Tssr94695 10 81176643 to 81176648 5 + TSS region transcription start site region 94695
Tssr94696 10 81177693 to 81177737 44 + TSS region transcription start site region 94696
Tssr94697 10 81177809 to 81177837 28 + TSS region transcription start site region 94697
Tssr94698 10 81178049 to 81178088 39 + TSS region transcription start site region 94698
Snord37 10 81178961 to 81179013 52 + snoRNA gene small nucleolar RNA, C/D box 37
Tssr94699 10 81179150 to 81179205 55 + TSS region transcription start site region 94699
Tssr94700 10 81179334 to 81179349 15 + TSS region transcription start site region 94700
Tssr98570 10 81179378 to 81179413 35 - TSS region transcription start site region 98570
Tssr94701 10 81179394 to 81179418 24 + TSS region transcription start site region 94701
Tssr94702 10 81179571 to 81179583 12 + TSS region transcription start site region 94702
Tssr94703 10 81179634 to 81179648 14 + TSS region transcription start site region 94703
Tssr94704 10 81179653 to 81179674 21 + TSS region transcription start site region 94704
Tssr94705 10 81179681 to 81179739 58 + TSS region transcription start site region 94705