Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:80841836-80901852

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lingo3 10 80832801 to 80844039 11238 - protein coding gene leucine rich repeat and Ig domain containing 3
Cpgi1914 10 80843316 to 80844477 1161 CpG island CpG island 1914
Tssr98522 10 80844007 to 80844021 14 - TSS region transcription start site region 98522
Tssr98523 10 80844025 to 80844067 42 - TSS region transcription start site region 98523
Lsm7 10 80852821 to 80855209 2388 - protein coding gene LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
Cpgi1915 10 80854744 to 80856064 1320 CpG island CpG island 1915
Tssr98524 10 80855175 to 80855186 11 - TSS region transcription start site region 98524
Tssr98525 10 80855187 to 80855220 33 - TSS region transcription start site region 98525
Tssr3280 10 80855265 to 80855280 15 + TSS region transcription start site region 3280
Sppl2b 10 80855275 to 80868708 13433 + protein coding gene signal peptide peptidase like 2B
Tssr94631 10 80855289 to 80855322 33 + TSS region transcription start site region 94631
Tssr94632 10 80855323 to 80855338 15 + TSS region transcription start site region 94632
Tssr94633 10 80857114 to 80857137 23 + TSS region transcription start site region 94633
Cpgi1916 10 80864191 to 80864688 497 CpG island CpG island 1916
Tssr94634 10 80871800 to 80871824 24 + TSS region transcription start site region 94634
Tssr94635 10 80871836 to 80871852 16 + TSS region transcription start site region 94635
Tmprss9 10 80871848 to 80899492 27644 + protein coding gene transmembrane protease, serine 9
Tssr94636 10 80874241 to 80874247 6 + TSS region transcription start site region 94636
Cpgi1917 10 80888174 to 80888582 408 CpG island CpG island 1917
Cpgi1918 10 80890154 to 80890430 276 CpG island CpG island 1918
Cpgi1919 10 80897199 to 80897352 153 CpG island CpG island 1919
Cpgi1920 10 80897729 to 80898266 537 CpG island CpG island 1920
Timm13 10 80899450 to 80900969 1519 - protein coding gene translocase of inner mitochondrial membrane 13
Cpgi1921 10 80899989 to 80901170 1181 CpG island CpG island 1921
Tssr94637 10 80900407 to 80900429 22 + TSS region transcription start site region 94637
Tssr98526 10 80900749 to 80900819 70 - TSS region transcription start site region 98526
Lmnb2 10 80901363 to 80918245 16882 - protein coding gene lamin B2