Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:80811848-80959492

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86 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Jsrp1 10 80808496 to 80813498 5002 - protein coding gene junctional sarcoplasmic reticulum protein 1
Tssr98517 10 80812563 to 80812584 21 - TSS region transcription start site region 98517
Tssr98518 10 80813486 to 80813533 47 - TSS region transcription start site region 98518
Tssr98519 10 80818514 to 80818518 4 - TSS region transcription start site region 98519
Cpgi1912 10 80826196 to 80827690 1494 CpG island CpG island 1912
Tssr98520 10 80826211 to 80826277 66 - TSS region transcription start site region 98520
Tssr94629 10 80826367 to 80826381 14 + TSS region transcription start site region 94629
Oaz1 10 80826656 to 80829290 2634 + protein coding gene ornithine decarboxylase antizyme 1
Tssr94630 10 80826669 to 80826693 24 + TSS region transcription start site region 94630
Tssr98521 10 80826988 to 80827018 30 - TSS region transcription start site region 98521
Mir1982 10 80828797 to 80828870 73 + miRNA gene microRNA 1982
Lingo3 10 80832801 to 80844039 11238 - protein coding gene leucine rich repeat and Ig domain containing 3
Cpgi1913 10 80834297 to 80836163 1866 CpG island CpG island 1913
Cpgi1914 10 80843316 to 80844477 1161 CpG island CpG island 1914
Tssr98522 10 80844007 to 80844021 14 - TSS region transcription start site region 98522
Tssr98523 10 80844025 to 80844067 42 - TSS region transcription start site region 98523
Lsm7 10 80852821 to 80855209 2388 - protein coding gene LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
Cpgi1915 10 80854744 to 80856064 1320 CpG island CpG island 1915
Tssr98524 10 80855175 to 80855186 11 - TSS region transcription start site region 98524
Tssr98525 10 80855187 to 80855220 33 - TSS region transcription start site region 98525
Tssr3280 10 80855265 to 80855280 15 + TSS region transcription start site region 3280
Sppl2b 10 80855275 to 80868708 13433 + protein coding gene signal peptide peptidase like 2B
Tssr94631 10 80855289 to 80855322 33 + TSS region transcription start site region 94631
Tssr94632 10 80855323 to 80855338 15 + TSS region transcription start site region 94632
Tssr94633 10 80857114 to 80857137 23 + TSS region transcription start site region 94633
Cpgi1916 10 80864191 to 80864688 497 CpG island CpG island 1916
Tssr94634 10 80871800 to 80871824 24 + TSS region transcription start site region 94634
Tssr94635 10 80871836 to 80871852 16 + TSS region transcription start site region 94635
Tmprss9 10 80871848 to 80899492 27644 + protein coding gene transmembrane protease, serine 9
Tssr94636 10 80874241 to 80874247 6 + TSS region transcription start site region 94636
Cpgi1917 10 80888174 to 80888582 408 CpG island CpG island 1917
Cpgi1918 10 80890154 to 80890430 276 CpG island CpG island 1918
Cpgi1919 10 80897199 to 80897352 153 CpG island CpG island 1919
Cpgi1920 10 80897729 to 80898266 537 CpG island CpG island 1920
Timm13 10 80899450 to 80900969 1519 - protein coding gene translocase of inner mitochondrial membrane 13
Cpgi1921 10 80899989 to 80901170 1181 CpG island CpG island 1921
Tssr94637 10 80900407 to 80900429 22 + TSS region transcription start site region 94637
Tssr98526 10 80900749 to 80900819 70 - TSS region transcription start site region 98526
Lmnb2 10 80901363 to 80918245 16882 - protein coding gene lamin B2
Tssr98527 10 80906410 to 80906416 6 - TSS region transcription start site region 98527
Tssr98528 10 80906423 to 80906442 19 - TSS region transcription start site region 98528
Cpgi1922 10 80917528 to 80918580 1052 CpG island CpG island 1922
Tssr98529 10 80918048 to 80918060 12 - TSS region transcription start site region 98529
Tssr98530 10 80918067 to 80918078 11 - TSS region transcription start site region 98530
Tssr98531 10 80918182 to 80918209 27 - TSS region transcription start site region 98531
Tssr98532 10 80918212 to 80918256 44 - TSS region transcription start site region 98532
Cpgi1923 10 80928610 to 80931244 2634 CpG island CpG island 1923
Tssr94638 10 80929094 to 80929101 7 + TSS region transcription start site region 94638
Tssr94639 10 80929815 to 80929830 15 + TSS region transcription start site region 94639
Tssr94640 10 80930071 to 80930075 4 + TSS region transcription start site region 94640
Gadd45b 10 80930091 to 80932204 2113 + protein coding gene growth arrest and DNA-damage-inducible 45 beta
Tssr94641 10 80930130 to 80930137 7 + TSS region transcription start site region 94641
Tssr94642 10 80930232 to 80930240 8 + TSS region transcription start site region 94642
Tssr94643 10 80930256 to 80930266 10 + TSS region transcription start site region 94643
Tssr94644 10 80930351 to 80930360 9 + TSS region transcription start site region 94644
Tssr94645 10 80930639 to 80930649 10 + TSS region transcription start site region 94645
Tssr94646 10 80930685 to 80930696 11 + TSS region transcription start site region 94646
Tssr94647 10 80930710 to 80930718 8 + TSS region transcription start site region 94647
Tssr94648 10 80930719 to 80930733 14 + TSS region transcription start site region 94648
Tssr94649 10 80930755 to 80930763 8 + TSS region transcription start site region 94649
Tssr94650 10 80930765 to 80930779 14 + TSS region transcription start site region 94650
Tssr94651 10 80930783 to 80930792 9 + TSS region transcription start site region 94651
Tssr94652 10 80930820 to 80930838 18 + TSS region transcription start site region 94652
Tssr94653 10 80930857 to 80930862 5 + TSS region transcription start site region 94653
Tssr94654 10 80930874 to 80930897 23 + TSS region transcription start site region 94654
Tssr94655 10 80930909 to 80930924 15 + TSS region transcription start site region 94655
Tssr94656 10 80930945 to 80930955 10 + TSS region transcription start site region 94656
Tssr94657 10 80930974 to 80930983 9 + TSS region transcription start site region 94657
Cpgi1924 10 80931815 to 80932487 672 CpG island CpG island 1924
Cpgi1925 10 80933544 to 80933958 414 CpG island CpG island 1925
Cpgi1926 10 80935794 to 80936159 365 CpG island CpG island 1926
Cpgi1927 10 80936315 to 80936996 681 CpG island CpG island 1927
Cpgi1928 10 80939647 to 80940100 453 CpG island CpG island 1928
Tssr98533 10 80939703 to 80939708 5 - TSS region transcription start site region 98533
Tssr98534 10 80939804 to 80939809 5 - TSS region transcription start site region 98534
Tssr94658 10 80940076 to 80940096 20 + TSS region transcription start site region 94658
Tssr94659 10 80940215 to 80940226 11 + TSS region transcription start site region 94659
Tssr94660 10 80940239 to 80940243 4 + TSS region transcription start site region 94660
Tssr94661 10 80940264 to 80940269 5 + TSS region transcription start site region 94661
Tssr94662 10 80940638 to 80940659 21 + TSS region transcription start site region 94662
Tssr98535 10 80941898 to 80941906 8 - TSS region transcription start site region 98535
Gng7 10 80948624 to 81014925 66301 - protein coding gene guanine nucleotide binding protein (G protein), gamma 7
Cpgi1929 10 80952766 to 80953011 245 CpG island CpG island 1929
Gm3828 10 80954454 to 80954710 256 - pseudogene predicted gene 3828
Tssr98536 10 80954718 to 80954739 21 - TSS region transcription start site region 98536
Tssr98537 10 80957829 to 80957848 19 - TSS region transcription start site region 98537