Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:80804150-81554205

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453 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sf3a2 10 80798589 to 80804924 6335 + protein coding gene splicing factor 3a, subunit 2
Tssr94621 10 80804124 to 80804150 26 + TSS region transcription start site region 94621
Tssr94622 10 80804211 to 80804227 16 + TSS region transcription start site region 94622
Tssr94623 10 80804720 to 80804740 20 + TSS region transcription start site region 94623
Tssr94624 10 80805233 to 80805249 16 + TSS region transcription start site region 94624
Amh 10 80805243 to 80807648 2405 + protein coding gene anti-Mullerian hormone
Tssr94625 10 80806128 to 80806141 13 + TSS region transcription start site region 94625
Cpgi1909 10 80806378 to 80807864 1486 CpG island CpG island 1909
Tssr94626 10 80806399 to 80806410 11 + TSS region transcription start site region 94626
Tssr94627 10 80806830 to 80806840 10 + TSS region transcription start site region 94627
Tssr98516 10 80807633 to 80807660 27 - TSS region transcription start site region 98516
Tssr94628 10 80807675 to 80807699 24 + TSS region transcription start site region 94628
Cpgi1910 10 80808167 to 80809179 1012 CpG island CpG island 1910
Jsrp1 10 80808496 to 80813498 5002 - protein coding gene junctional sarcoplasmic reticulum protein 1
Cpgi1911 10 80810159 to 80810580 421 CpG island CpG island 1911
Tssr98517 10 80812563 to 80812584 21 - TSS region transcription start site region 98517
Tssr98518 10 80813486 to 80813533 47 - TSS region transcription start site region 98518
Tssr98519 10 80818514 to 80818518 4 - TSS region transcription start site region 98519
Cpgi1912 10 80826196 to 80827690 1494 CpG island CpG island 1912
Tssr98520 10 80826211 to 80826277 66 - TSS region transcription start site region 98520
Tssr94629 10 80826367 to 80826381 14 + TSS region transcription start site region 94629
Oaz1 10 80826656 to 80829290 2634 + protein coding gene ornithine decarboxylase antizyme 1
Tssr94630 10 80826669 to 80826693 24 + TSS region transcription start site region 94630
Tssr98521 10 80826988 to 80827018 30 - TSS region transcription start site region 98521
Mir1982 10 80828797 to 80828870 73 + miRNA gene microRNA 1982
Lingo3 10 80832801 to 80844039 11238 - protein coding gene leucine rich repeat and Ig domain containing 3
Cpgi1913 10 80834297 to 80836163 1866 CpG island CpG island 1913
Cpgi1914 10 80843316 to 80844477 1161 CpG island CpG island 1914
Tssr98522 10 80844007 to 80844021 14 - TSS region transcription start site region 98522
Tssr98523 10 80844025 to 80844067 42 - TSS region transcription start site region 98523
Lsm7 10 80852821 to 80855209 2388 - protein coding gene LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
Cpgi1915 10 80854744 to 80856064 1320 CpG island CpG island 1915
Tssr98524 10 80855175 to 80855186 11 - TSS region transcription start site region 98524
Tssr98525 10 80855187 to 80855220 33 - TSS region transcription start site region 98525
Tssr3280 10 80855265 to 80855280 15 + TSS region transcription start site region 3280
Sppl2b 10 80855275 to 80868708 13433 + protein coding gene signal peptide peptidase like 2B
Tssr94631 10 80855289 to 80855322 33 + TSS region transcription start site region 94631
Tssr94632 10 80855323 to 80855338 15 + TSS region transcription start site region 94632
Tssr94633 10 80857114 to 80857137 23 + TSS region transcription start site region 94633
Cpgi1916 10 80864191 to 80864688 497 CpG island CpG island 1916
Tssr94634 10 80871800 to 80871824 24 + TSS region transcription start site region 94634
Tssr94635 10 80871836 to 80871852 16 + TSS region transcription start site region 94635
Tmprss9 10 80871848 to 80899492 27644 + protein coding gene transmembrane protease, serine 9
Tssr94636 10 80874241 to 80874247 6 + TSS region transcription start site region 94636
Cpgi1917 10 80888174 to 80888582 408 CpG island CpG island 1917
Cpgi1918 10 80890154 to 80890430 276 CpG island CpG island 1918
Cpgi1919 10 80897199 to 80897352 153 CpG island CpG island 1919
Cpgi1920 10 80897729 to 80898266 537 CpG island CpG island 1920
Timm13 10 80899450 to 80900969 1519 - protein coding gene translocase of inner mitochondrial membrane 13
Cpgi1921 10 80899989 to 80901170 1181 CpG island CpG island 1921
Tssr94637 10 80900407 to 80900429 22 + TSS region transcription start site region 94637
Tssr98526 10 80900749 to 80900819 70 - TSS region transcription start site region 98526
Lmnb2 10 80901363 to 80918245 16882 - protein coding gene lamin B2
Tssr98527 10 80906410 to 80906416 6 - TSS region transcription start site region 98527
Tssr98528 10 80906423 to 80906442 19 - TSS region transcription start site region 98528
Cpgi1922 10 80917528 to 80918580 1052 CpG island CpG island 1922
Tssr98529 10 80918048 to 80918060 12 - TSS region transcription start site region 98529
Tssr98530 10 80918067 to 80918078 11 - TSS region transcription start site region 98530
Tssr98531 10 80918182 to 80918209 27 - TSS region transcription start site region 98531
Tssr98532 10 80918212 to 80918256 44 - TSS region transcription start site region 98532
Cpgi1923 10 80928610 to 80931244 2634 CpG island CpG island 1923
Tssr94638 10 80929094 to 80929101 7 + TSS region transcription start site region 94638
Tssr94639 10 80929815 to 80929830 15 + TSS region transcription start site region 94639
Tssr94640 10 80930071 to 80930075 4 + TSS region transcription start site region 94640
Gadd45b 10 80930091 to 80932204 2113 + protein coding gene growth arrest and DNA-damage-inducible 45 beta
Tssr94641 10 80930130 to 80930137 7 + TSS region transcription start site region 94641
Tssr94642 10 80930232 to 80930240 8 + TSS region transcription start site region 94642
Tssr94643 10 80930256 to 80930266 10 + TSS region transcription start site region 94643
Tssr94644 10 80930351 to 80930360 9 + TSS region transcription start site region 94644
Tssr94645 10 80930639 to 80930649 10 + TSS region transcription start site region 94645
Tssr94646 10 80930685 to 80930696 11 + TSS region transcription start site region 94646
Tssr94647 10 80930710 to 80930718 8 + TSS region transcription start site region 94647
Tssr94648 10 80930719 to 80930733 14 + TSS region transcription start site region 94648
Tssr94649 10 80930755 to 80930763 8 + TSS region transcription start site region 94649
Tssr94650 10 80930765 to 80930779 14 + TSS region transcription start site region 94650
Tssr94651 10 80930783 to 80930792 9 + TSS region transcription start site region 94651
Tssr94652 10 80930820 to 80930838 18 + TSS region transcription start site region 94652
Tssr94653 10 80930857 to 80930862 5 + TSS region transcription start site region 94653
Tssr94654 10 80930874 to 80930897 23 + TSS region transcription start site region 94654
Tssr94655 10 80930909 to 80930924 15 + TSS region transcription start site region 94655
Tssr94656 10 80930945 to 80930955 10 + TSS region transcription start site region 94656
Tssr94657 10 80930974 to 80930983 9 + TSS region transcription start site region 94657
Cpgi1924 10 80931815 to 80932487 672 CpG island CpG island 1924
Cpgi1925 10 80933544 to 80933958 414 CpG island CpG island 1925
Cpgi1926 10 80935794 to 80936159 365 CpG island CpG island 1926
Cpgi1927 10 80936315 to 80936996 681 CpG island CpG island 1927
Cpgi1928 10 80939647 to 80940100 453 CpG island CpG island 1928
Tssr98533 10 80939703 to 80939708 5 - TSS region transcription start site region 98533
Tssr98534 10 80939804 to 80939809 5 - TSS region transcription start site region 98534
Tssr94658 10 80940076 to 80940096 20 + TSS region transcription start site region 94658
Tssr94659 10 80940215 to 80940226 11 + TSS region transcription start site region 94659
Tssr94660 10 80940239 to 80940243 4 + TSS region transcription start site region 94660
Tssr94661 10 80940264 to 80940269 5 + TSS region transcription start site region 94661
Tssr94662 10 80940638 to 80940659 21 + TSS region transcription start site region 94662
Tssr98535 10 80941898 to 80941906 8 - TSS region transcription start site region 98535
Gng7 10 80948624 to 81014925 66301 - protein coding gene guanine nucleotide binding protein (G protein), gamma 7
Cpgi1929 10 80952766 to 80953011 245 CpG island CpG island 1929
Gm3828 10 80954454 to 80954710 256 - pseudogene predicted gene 3828
Tssr98536 10 80954718 to 80954739 21 - TSS region transcription start site region 98536
Tssr98537 10 80957829 to 80957848 19 - TSS region transcription start site region 98537
Cpgi1930 10 80985355 to 80986048 693 CpG island CpG island 1930
Cpgi1931 10 80997956 to 80998278 322 CpG island CpG island 1931
Tssr98538 10 80998121 to 80998132 11 - TSS region transcription start site region 98538
Tssr98539 10 80998146 to 80998163 17 - TSS region transcription start site region 98539
Tssr98540 10 80998174 to 80998192 18 - TSS region transcription start site region 98540
Cpgi1932 10 80999465 to 81000111 646 CpG island CpG island 1932
Tssr94663 10 81000716 to 81000721 5 + TSS region transcription start site region 94663
Tssr98541 10 81001258 to 81001288 30 - TSS region transcription start site region 98541
Tssr98542 10 81001338 to 81001370 32 - TSS region transcription start site region 98542
Tssr94664 10 81010282 to 81010284 2 + TSS region transcription start site region 94664
Cpgi1933 10 81014796 to 81015115 319 CpG island CpG island 1933
Tssr98543 10 81014878 to 81014901 23 - TSS region transcription start site region 98543
Tssr98544 10 81014902 to 81014937 35 - TSS region transcription start site region 98544
Diras1 10 81019589 to 81025662 6073 - protein coding gene DIRAS family, GTP-binding RAS-like 1
Cpgi1934 10 81021693 to 81022627 934 CpG island CpG island 1934
Cpgi1935 10 81024768 to 81025721 953 CpG island CpG island 1935
Gm16099 10 81024811 to 81026567 1756 + antisense lncRNA gene predicted gene 16099
Tssr98545 10 81025363 to 81025402 39 - TSS region transcription start site region 98545
Tssr98546 10 81025406 to 81025411 5 - TSS region transcription start site region 98546
Tssr98547 10 81025521 to 81025559 38 - TSS region transcription start site region 98547
Tssr98548 10 81025804 to 81025821 17 - TSS region transcription start site region 98548
Tssr98549 10 81026185 to 81026204 19 - TSS region transcription start site region 98549
Slc39a3 10 81028540 to 81037421 8881 - protein coding gene solute carrier family 39 (zinc transporter), member 3
Cpgi1936 10 81036985 to 81037538 553 CpG island CpG island 1936
Tssr98550 10 81037258 to 81037295 37 - TSS region transcription start site region 98550
Tssr98551 10 81037300 to 81037339 39 - TSS region transcription start site region 98551
Sgta 10 81044075 to 81060181 16106 - protein coding gene small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha
Tssr98552 10 81050995 to 81050999 4 - TSS region transcription start site region 98552
Tssr3281 10 81057523 to 81057527 4 + TSS region transcription start site region 3281
Cpgi1937 10 81059778 to 81060446 668 CpG island CpG island 1937
Tssr98553 10 81060134 to 81060204 70 - TSS region transcription start site region 98553
Cpgi1938 10 81069609 to 81070540 931 CpG island CpG island 1938
Tssr94665 10 81070037 to 81070046 9 + TSS region transcription start site region 94665
Tssr94666 10 81070062 to 81070121 59 + TSS region transcription start site region 94666
Thop1 10 81070083 to 81082360 12277 + protein coding gene thimet oligopeptidase 1
Tssr94667 10 81070138 to 81070153 15 + TSS region transcription start site region 94667
Tssr94668 10 81070235 to 81070246 11 + TSS region transcription start site region 94668
Tssr94669 10 81075513 to 81075541 28 + TSS region transcription start site region 94669
Cpgi1939 10 81080029 to 81080638 609 CpG island CpG island 1939
Creb3l3 10 81084333 to 81098872 14539 - protein coding gene cAMP responsive element binding protein 3-like 3
Tssr98554 10 81089333 to 81089342 9 - TSS region transcription start site region 98554
Tssr98555 10 81092540 to 81092546 6 - TSS region transcription start site region 98555
Tssr98556 10 81092554 to 81092561 7 - TSS region transcription start site region 98556
Tssr98557 10 81092575 to 81092633 58 - TSS region transcription start site region 98557
Tssr98558 10 81092653 to 81092664 11 - TSS region transcription start site region 98558
D10Mit7 10 81098438 to 81098583 145 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 7
Tssr94670 10 81102683 to 81102688 5 + TSS region transcription start site region 94670
Mir5615-1 10 81104614 to 81104673 59 - miRNA gene microRNA 5615-1
Mir5615-2 10 81104616 to 81104675 59 + miRNA gene microRNA 5615-2
Cpgi1940 10 81105396 to 81106840 1444 CpG island CpG island 1940
Tssr98559 10 81105841 to 81105883 42 - TSS region transcription start site region 98559
Map2k2 10 81105912 to 81124697 18785 + protein coding gene mitogen-activated protein kinase kinase 2
Tssr94671 10 81105918 to 81105932 14 + TSS region transcription start site region 94671
Tssr94672 10 81105933 to 81106004 71 + TSS region transcription start site region 94672
Tssr94673 10 81118124 to 81118159 35 + TSS region transcription start site region 94673
Tssr94674 10 81120933 to 81120986 53 + TSS region transcription start site region 94674
Tssr94675 10 81123818 to 81123825 7 + TSS region transcription start site region 94675
Tssr94676 10 81128975 to 81128998 23 + TSS region transcription start site region 94676
Cpgi1941 10 81128995 to 81129693 698 CpG island CpG island 1941
Tssr98560 10 81129048 to 81129085 37 - TSS region transcription start site region 98560
Tssr98561 10 81129450 to 81129461 11 - TSS region transcription start site region 98561
Cpgi1942 10 81134213 to 81134486 273 CpG island CpG island 1942
Tssr98562 10 81134377 to 81134419 42 - TSS region transcription start site region 98562
Tssr94677 10 81134464 to 81134495 31 + TSS region transcription start site region 94677
Cpgi1943 10 81135151 to 81138771 3620 CpG island CpG island 1943
Zbtb7a 10 81135225 to 81152222 16997 + protein coding gene zinc finger and BTB domain containing 7a
Tssr94678 10 81135273 to 81135291 18 + TSS region transcription start site region 94678
Tssr94679 10 81135464 to 81135491 27 + TSS region transcription start site region 94679
Tssr94680 10 81136223 to 81136267 44 + TSS region transcription start site region 94680
Tssr94681 10 81136331 to 81136382 51 + TSS region transcription start site region 94681
Tssr94682 10 81136503 to 81136516 13 + TSS region transcription start site region 94682
Tssr94683 10 81136534 to 81136608 74 + TSS region transcription start site region 94683
Tssr94684 10 81137720 to 81137744 24 + TSS region transcription start site region 94684
Tssr94685 10 81137980 to 81137992 12 + TSS region transcription start site region 94685
Tssr94686 10 81138004 to 81138021 17 + TSS region transcription start site region 94686
Tssr94687 10 81139505 to 81139512 7 + TSS region transcription start site region 94687
Cpgi1944 10 81147837 to 81148662 825 CpG island CpG island 1944
Tssr94688 10 81148411 to 81148427 16 + TSS region transcription start site region 94688
Tssr98563 10 81148420 to 81148432 12 - TSS region transcription start site region 98563
Tssr94689 10 81149253 to 81149297 44 + TSS region transcription start site region 94689
Tssr94690 10 81150701 to 81150738 37 + TSS region transcription start site region 94690
Tssr94691 10 81151001 to 81151013 12 + TSS region transcription start site region 94691
Tssr94692 10 81151460 to 81151474 14 + TSS region transcription start site region 94692
Tssr98564 10 81151729 to 81151775 46 - TSS region transcription start site region 98564
Cpgi1945 10 81153348 to 81154625 1277 CpG island CpG island 1945
Pias4 10 81153961 to 81167720 13759 - protein coding gene protein inhibitor of activated STAT 4
Tssr3282 10 81160717 to 81160720 3 + TSS region transcription start site region 3282
Cpgi1946 10 81167011 to 81168043 1032 CpG island CpG island 1946
Tssr98565 10 81167710 to 81167754 44 - TSS region transcription start site region 98565
Tssr98566 10 81167770 to 81167781 11 - TSS region transcription start site region 98566
Tssr98567 10 81167838 to 81167849 11 - TSS region transcription start site region 98567
Tssr98568 10 81167896 to 81167905 9 - TSS region transcription start site region 98568
Tssr94693 10 81168022 to 81168040 18 + TSS region transcription start site region 94693
Cpgi1947 10 81168879 to 81169183 304 CpG island CpG island 1947
Tssr98569 10 81168880 to 81168884 4 - TSS region transcription start site region 98569
Cpgi1948 10 81173161 to 81173476 315 CpG island CpG island 1948
Tssr94694 10 81173303 to 81173327 24 + TSS region transcription start site region 94694
Cpgi1949 10 81174705 to 81175125 420 CpG island CpG island 1949
Cpgi1950 10 81176365 to 81178176 1811 CpG island CpG island 1950
Eef2 10 81176631 to 81182498 5867 + protein coding gene eukaryotic translation elongation factor 2