Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:80804025-80884067

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sf3a2 10 80798589 to 80804924 6335 + protein coding gene splicing factor 3a, subunit 2
Tssr98515 10 80804027 to 80804071 44 - TSS region transcription start site region 98515
Tssr94618 10 80804037 to 80804063 26 + TSS region transcription start site region 94618
Tssr94619 10 80804068 to 80804090 22 + TSS region transcription start site region 94619
Tssr94620 10 80804100 to 80804118 18 + TSS region transcription start site region 94620
Tssr94621 10 80804124 to 80804150 26 + TSS region transcription start site region 94621
Tssr94622 10 80804211 to 80804227 16 + TSS region transcription start site region 94622
Tssr94623 10 80804720 to 80804740 20 + TSS region transcription start site region 94623
Tssr94624 10 80805233 to 80805249 16 + TSS region transcription start site region 94624
Amh 10 80805243 to 80807648 2405 + protein coding gene anti-Mullerian hormone
Tssr94625 10 80806128 to 80806141 13 + TSS region transcription start site region 94625
Cpgi1909 10 80806378 to 80807864 1486 CpG island CpG island 1909
Tssr94626 10 80806399 to 80806410 11 + TSS region transcription start site region 94626
Tssr94627 10 80806830 to 80806840 10 + TSS region transcription start site region 94627
Tssr98516 10 80807633 to 80807660 27 - TSS region transcription start site region 98516
Tssr94628 10 80807675 to 80807699 24 + TSS region transcription start site region 94628
Cpgi1910 10 80808167 to 80809179 1012 CpG island CpG island 1910
Jsrp1 10 80808496 to 80813498 5002 - protein coding gene junctional sarcoplasmic reticulum protein 1
Cpgi1911 10 80810159 to 80810580 421 CpG island CpG island 1911
Tssr98517 10 80812563 to 80812584 21 - TSS region transcription start site region 98517
Tssr98518 10 80813486 to 80813533 47 - TSS region transcription start site region 98518
Tssr98519 10 80818514 to 80818518 4 - TSS region transcription start site region 98519
Cpgi1912 10 80826196 to 80827690 1494 CpG island CpG island 1912
Tssr98520 10 80826211 to 80826277 66 - TSS region transcription start site region 98520
Tssr94629 10 80826367 to 80826381 14 + TSS region transcription start site region 94629
Oaz1 10 80826656 to 80829290 2634 + protein coding gene ornithine decarboxylase antizyme 1
Tssr94630 10 80826669 to 80826693 24 + TSS region transcription start site region 94630
Tssr98521 10 80826988 to 80827018 30 - TSS region transcription start site region 98521
Mir1982 10 80828797 to 80828870 73 + miRNA gene microRNA 1982
Lingo3 10 80832801 to 80844039 11238 - protein coding gene leucine rich repeat and Ig domain containing 3
Cpgi1913 10 80834297 to 80836163 1866 CpG island CpG island 1913
Cpgi1914 10 80843316 to 80844477 1161 CpG island CpG island 1914
Tssr98522 10 80844007 to 80844021 14 - TSS region transcription start site region 98522
Tssr98523 10 80844025 to 80844067 42 - TSS region transcription start site region 98523
Lsm7 10 80852821 to 80855209 2388 - protein coding gene LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
Cpgi1915 10 80854744 to 80856064 1320 CpG island CpG island 1915
Tssr98524 10 80855175 to 80855186 11 - TSS region transcription start site region 98524
Tssr98525 10 80855187 to 80855220 33 - TSS region transcription start site region 98525
Tssr3280 10 80855265 to 80855280 15 + TSS region transcription start site region 3280
Sppl2b 10 80855275 to 80868708 13433 + protein coding gene signal peptide peptidase like 2B
Tssr94631 10 80855289 to 80855322 33 + TSS region transcription start site region 94631
Tssr94632 10 80855323 to 80855338 15 + TSS region transcription start site region 94632
Tssr94633 10 80857114 to 80857137 23 + TSS region transcription start site region 94633
Cpgi1916 10 80864191 to 80864688 497 CpG island CpG island 1916
Tssr94634 10 80871800 to 80871824 24 + TSS region transcription start site region 94634
Tssr94635 10 80871836 to 80871852 16 + TSS region transcription start site region 94635
Tmprss9 10 80871848 to 80899492 27644 + protein coding gene transmembrane protease, serine 9
Tssr94636 10 80874241 to 80874247 6 + TSS region transcription start site region 94636