Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:80800187-80910220

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65 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sf3a2 10 80798589 to 80804924 6335 + protein coding gene splicing factor 3a, subunit 2
Tssr94612 10 80802398 to 80802403 5 + TSS region transcription start site region 94612
Tssr94613 10 80802807 to 80802822 15 + TSS region transcription start site region 94613
Tssr94614 10 80803281 to 80803292 11 + TSS region transcription start site region 94614
Tssr94615 10 80803601 to 80803617 16 + TSS region transcription start site region 94615
Tssr94616 10 80803645 to 80803660 15 + TSS region transcription start site region 94616
Tssr94617 10 80803663 to 80803682 19 + TSS region transcription start site region 94617
Tssr98515 10 80804027 to 80804071 44 - TSS region transcription start site region 98515
Tssr94618 10 80804037 to 80804063 26 + TSS region transcription start site region 94618
Tssr94619 10 80804068 to 80804090 22 + TSS region transcription start site region 94619
Tssr94620 10 80804100 to 80804118 18 + TSS region transcription start site region 94620
Tssr94621 10 80804124 to 80804150 26 + TSS region transcription start site region 94621
Tssr94622 10 80804211 to 80804227 16 + TSS region transcription start site region 94622
Tssr94623 10 80804720 to 80804740 20 + TSS region transcription start site region 94623
Tssr94624 10 80805233 to 80805249 16 + TSS region transcription start site region 94624
Amh 10 80805243 to 80807648 2405 + protein coding gene anti-Mullerian hormone
Tssr94625 10 80806128 to 80806141 13 + TSS region transcription start site region 94625
Cpgi1909 10 80806378 to 80807864 1486 CpG island CpG island 1909
Tssr94626 10 80806399 to 80806410 11 + TSS region transcription start site region 94626
Tssr94627 10 80806830 to 80806840 10 + TSS region transcription start site region 94627
Tssr98516 10 80807633 to 80807660 27 - TSS region transcription start site region 98516
Tssr94628 10 80807675 to 80807699 24 + TSS region transcription start site region 94628
Cpgi1910 10 80808167 to 80809179 1012 CpG island CpG island 1910
Jsrp1 10 80808496 to 80813498 5002 - protein coding gene junctional sarcoplasmic reticulum protein 1
Cpgi1911 10 80810159 to 80810580 421 CpG island CpG island 1911
Tssr98517 10 80812563 to 80812584 21 - TSS region transcription start site region 98517
Tssr98518 10 80813486 to 80813533 47 - TSS region transcription start site region 98518
Tssr98519 10 80818514 to 80818518 4 - TSS region transcription start site region 98519
Cpgi1912 10 80826196 to 80827690 1494 CpG island CpG island 1912
Tssr98520 10 80826211 to 80826277 66 - TSS region transcription start site region 98520
Tssr94629 10 80826367 to 80826381 14 + TSS region transcription start site region 94629
Oaz1 10 80826656 to 80829290 2634 + protein coding gene ornithine decarboxylase antizyme 1
Tssr94630 10 80826669 to 80826693 24 + TSS region transcription start site region 94630
Tssr98521 10 80826988 to 80827018 30 - TSS region transcription start site region 98521
Mir1982 10 80828797 to 80828870 73 + miRNA gene microRNA 1982
Lingo3 10 80832801 to 80844039 11238 - protein coding gene leucine rich repeat and Ig domain containing 3
Cpgi1913 10 80834297 to 80836163 1866 CpG island CpG island 1913
Cpgi1914 10 80843316 to 80844477 1161 CpG island CpG island 1914
Tssr98522 10 80844007 to 80844021 14 - TSS region transcription start site region 98522
Tssr98523 10 80844025 to 80844067 42 - TSS region transcription start site region 98523
Lsm7 10 80852821 to 80855209 2388 - protein coding gene LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
Cpgi1915 10 80854744 to 80856064 1320 CpG island CpG island 1915
Tssr98524 10 80855175 to 80855186 11 - TSS region transcription start site region 98524
Tssr98525 10 80855187 to 80855220 33 - TSS region transcription start site region 98525
Tssr3280 10 80855265 to 80855280 15 + TSS region transcription start site region 3280
Sppl2b 10 80855275 to 80868708 13433 + protein coding gene signal peptide peptidase like 2B
Tssr94631 10 80855289 to 80855322 33 + TSS region transcription start site region 94631
Tssr94632 10 80855323 to 80855338 15 + TSS region transcription start site region 94632
Tssr94633 10 80857114 to 80857137 23 + TSS region transcription start site region 94633
Cpgi1916 10 80864191 to 80864688 497 CpG island CpG island 1916
Tssr94634 10 80871800 to 80871824 24 + TSS region transcription start site region 94634
Tssr94635 10 80871836 to 80871852 16 + TSS region transcription start site region 94635
Tmprss9 10 80871848 to 80899492 27644 + protein coding gene transmembrane protease, serine 9
Tssr94636 10 80874241 to 80874247 6 + TSS region transcription start site region 94636
Cpgi1917 10 80888174 to 80888582 408 CpG island CpG island 1917
Cpgi1918 10 80890154 to 80890430 276 CpG island CpG island 1918
Cpgi1919 10 80897199 to 80897352 153 CpG island CpG island 1919
Cpgi1920 10 80897729 to 80898266 537 CpG island CpG island 1920
Timm13 10 80899450 to 80900969 1519 - protein coding gene translocase of inner mitochondrial membrane 13
Cpgi1921 10 80899989 to 80901170 1181 CpG island CpG island 1921
Tssr94637 10 80900407 to 80900429 22 + TSS region transcription start site region 94637
Tssr98526 10 80900749 to 80900819 70 - TSS region transcription start site region 98526
Lmnb2 10 80901363 to 80918245 16882 - protein coding gene lamin B2
Tssr98527 10 80906410 to 80906416 6 - TSS region transcription start site region 98527
Tssr98528 10 80906423 to 80906442 19 - TSS region transcription start site region 98528