Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:80632282-80772313

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58 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Csnk1g2 10 80622838 to 80640749 17911 + protein coding gene casein kinase 1, gamma 2
Btbd2 10 80642617 to 80657071 14454 - protein coding gene BTB (POZ) domain containing 2
Tssr94588 10 80644573 to 80644590 17 + TSS region transcription start site region 94588
Tssr98480 10 80645537 to 80645549 12 - TSS region transcription start site region 98480
Cpgi1902 10 80655641 to 80657075 1434 CpG island CpG island 1902
Tssr98481 10 80656485 to 80656519 34 - TSS region transcription start site region 98481
Tssr98482 10 80656987 to 80657003 16 - TSS region transcription start site region 98482
Tssr98483 10 80657092 to 80657098 6 - TSS region transcription start site region 98483
Tssr98484 10 80657102 to 80657119 17 - TSS region transcription start site region 98484
Mknk2 10 80665318 to 80676293 10975 - protein coding gene MAP kinase-interacting serine/threonine kinase 2
Tssr98485 10 80665909 to 80665913 4 - TSS region transcription start site region 98485
Tssr98486 10 80666964 to 80666980 16 - TSS region transcription start site region 98486
Tssr98487 10 80668666 to 80668675 9 - TSS region transcription start site region 98487
Tssr98488 10 80668684 to 80668695 11 - TSS region transcription start site region 98488
Tssr98489 10 80668701 to 80668724 23 - TSS region transcription start site region 98489
Cpgi1903 10 80675446 to 80677148 1702 CpG island CpG island 1903
Tssr98490 10 80676290 to 80676295 5 - TSS region transcription start site region 98490
Tssr94589 10 80676778 to 80676799 21 + TSS region transcription start site region 94589
Tssr94590 10 80677408 to 80677419 11 + TSS region transcription start site region 94590
Tssr98491 10 80678106 to 80678129 23 - TSS region transcription start site region 98491
Gm26541 10 80681838 to 80687176 5338 + lincRNA gene predicted gene, 26541
Mob3a 10 80685253 to 80701820 16567 - protein coding gene MOB kinase activator 3A
Tssr94591 10 80692695 to 80692721 26 + TSS region transcription start site region 94591
Tssr94592 10 80695571 to 80695589 18 + TSS region transcription start site region 94592
Tssr94593 10 80696405 to 80696408 3 + TSS region transcription start site region 94593
Cpgi1904 10 80701577 to 80703182 1605 CpG island CpG island 1904
Tssr98492 10 80701811 to 80701878 67 - TSS region transcription start site region 98492
Tssr98493 10 80701879 to 80701899 20 - TSS region transcription start site region 98493
Tssr98494 10 80701936 to 80701986 50 - TSS region transcription start site region 98494
Izumo4 10 80702184 to 80705373 3189 + protein coding gene IZUMO family member 4
Tssr94594 10 80702282 to 80702313 31 + TSS region transcription start site region 94594
Tssr94595 10 80702649 to 80702761 112 + TSS region transcription start site region 94595
Ap3d1 10 80706956 to 80742264 35308 - protein coding gene adaptor-related protein complex 3, delta 1 subunit
Tssr94596 10 80712756 to 80712792 36 + TSS region transcription start site region 94596
Tssr98495 10 80713995 to 80714008 13 - TSS region transcription start site region 98495
Tssr98496 10 80714014 to 80714033 19 - TSS region transcription start site region 98496
Tssr98497 10 80714048 to 80714067 19 - TSS region transcription start site region 98497
Tssr98498 10 80723386 to 80723391 5 - TSS region transcription start site region 98498
Cpgi1905 10 80741639 to 80742561 922 CpG island CpG island 1905
Tssr98499 10 80742222 to 80742280 58 - TSS region transcription start site region 98499
Tssr3279 10 80752343 to 80752362 19 + TSS region transcription start site region 3279
Tssr94597 10 80752571 to 80752607 36 + TSS region transcription start site region 94597
Tssr98500 10 80754666 to 80754671 5 - TSS region transcription start site region 98500
Cpgi1906 10 80754854 to 80756356 1502 CpG island CpG island 1906
Tssr98501 10 80754914 to 80754938 24 - TSS region transcription start site region 98501
Tssr94598 10 80755123 to 80755132 9 + TSS region transcription start site region 94598
Tssr94599 10 80755196 to 80755239 43 + TSS region transcription start site region 94599
Dot1l 10 80755206 to 80795461 40255 + protein coding gene DOT1-like, histone H3 methyltransferase (S. cerevisiae)
Tssr94600 10 80755240 to 80755251 11 + TSS region transcription start site region 94600
Tssr94601 10 80755292 to 80755303 11 + TSS region transcription start site region 94601
Tssr94602 10 80755390 to 80755399 9 + TSS region transcription start site region 94602
Tssr98502 10 80756959 to 80756973 14 - TSS region transcription start site region 98502
Tssr98503 10 80756993 to 80757006 13 - TSS region transcription start site region 98503
Tssr98504 10 80757127 to 80757148 21 - TSS region transcription start site region 98504
Tssr98505 10 80757170 to 80757210 40 - TSS region transcription start site region 98505
Tssr94603 10 80763883 to 80763889 6 + TSS region transcription start site region 94603
Tssr94604 10 80765656 to 80765660 4 + TSS region transcription start site region 94604
Gm17151 10 80766859 to 80768987 2128 - antisense lncRNA gene predicted gene 17151