MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 10:80607521-80637526

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Adat3	10	80602880 to 80607654	4774	+	protein coding gene	adenosine deaminase, tRNA-specific 3
Scamp4	10	80602882 to 80615783	12901	+	protein coding gene	secretory carrier membrane protein 4
Gm49322	10	80606021 to 80615784	9763	+	protein coding gene	predicted gene, 49322
Tssr94580	10	80608849 to 80608854	5	+	TSS region	transcription start site region 94580
Mir6912	10	80609260 to 80609329	69	+	miRNA gene	microRNA 6912
Tssr94581	10	80609336 to 80609351	15	+	TSS region	transcription start site region 94581
Gm31298	10	80612960 to 80622610	9650	-	lncRNA gene	predicted gene, 31298
Tssr94582	10	80614949 to 80614979	30	+	TSS region	transcription start site region 94582
Tssr94583	10	80615391 to 80615435	44	+	TSS region	transcription start site region 94583
Cpgi1901	10	80621872 to 80623680	1808		CpG island	CpG island 1901
Tssr94584	10	80622211 to 80622216	5	+	TSS region	transcription start site region 94584
Tssr98477	10	80622521 to 80622526	5	-	TSS region	transcription start site region 98477
Tssr98478	10	80622594 to 80622609	15	-	TSS region	transcription start site region 98478
Tssr94585	10	80622677 to 80622758	81	+	TSS region	transcription start site region 94585
Csnk1g2	10	80622838 to 80640749	17911	+	protein coding gene	casein kinase 1, gamma 2
Tssr98479	10	80623607 to 80623648	41	-	TSS region	transcription start site region 98479
Tssr94586	10	80629646 to 80629655	9	+	TSS region	transcription start site region 94586
Tssr94587	10	80629671 to 80629687	16	+	TSS region	transcription start site region 94587