Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:80547121-80597296

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rexo1 10 80540922 to 80561560 20638 - protein coding gene REX1, RNA exonuclease 1
Gm31057 10 80547494 to 80555297 7803 + lncRNA gene predicted gene, 31057
Tssr98469 10 80548713 to 80548725 12 - TSS region transcription start site region 98469
Cpgi1894 10 80560732 to 80561946 1214 CpG island CpG island 1894
Tssr98470 10 80561528 to 80561557 29 - TSS region transcription start site region 98470
Klf16 10 80567121 to 80577296 10175 - protein coding gene Kruppel-like factor 16
Tssr98471 10 80567907 to 80567908 1 - TSS region transcription start site region 98471
Cpgi1895 10 80571137 to 80571459 322 CpG island CpG island 1895
Cpgi1896 10 80575908 to 80578692 2784 CpG island CpG island 1896
Tssr98472 10 80577255 to 80577274 19 - TSS region transcription start site region 98472
Tssr98473 10 80577285 to 80577327 42 - TSS region transcription start site region 98473
Gm26710 10 80578647 to 80580677 2030 + lincRNA gene predicted gene, 26710
Abhd17a 10 80583654 to 80590341 6687 - protein coding gene abhydrolase domain containing 17A
Cpgi1897 10 80583892 to 80584270 378 CpG island CpG island 1897
Cpgi1898 10 80586507 to 80587249 742 CpG island CpG island 1898
Tssr98474 10 80586548 to 80586587 39 - TSS region transcription start site region 98474
Tssr98475 10 80587297 to 80587316 19 - TSS region transcription start site region 98475
Gm29093 10 80587965 to 80589790 1825 - sense intronic lncRNA gene predicted gene 29093
Tssr94574 10 80589381 to 80589387 6 + TSS region transcription start site region 94574
Cpgi1899 10 80589730 to 80590702 972 CpG island CpG island 1899
Tssr98476 10 80590292 to 80590329 37 - TSS region transcription start site region 98476